Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.84□□□□□ -2.11
CTSDP07339 AC093591.3-201ENST00000634516 308 ntBASIC1.84□□□□□ -2.11
CTSDP07339 AC110079.1-202ENST00000635213 138 ntBASIC1.84□□□□□ -2.11
CTSDP07339 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.84□□□□□ -2.12
CTSDP07339 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.84□□□□□ -2.12
CTSDP07339 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CTSDP07339 AC130650.2-201ENST00000618736 2403 ntBASIC1.83□□□□□ -2.12
CTSDP07339 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.83□□□□□ -2.12
CTSDP07339 SNORA48.3-201ENST00000391081 134 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AL356057.1-202ENST00000402263 756 ntBASIC1.83□□□□□ -2.12
CTSDP07339 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.83□□□□□ -2.12
CTSDP07339 AC233981.1-201ENST00000423224 461 ntBASIC1.83□□□□□ -2.12
CTSDP07339 PNRC2P1-201ENST00000423940 420 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AL035410.1-201ENST00000427409 427 ntBASIC1.83□□□□□ -2.12
CTSDP07339 SRIP2-201ENST00000428470 166 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.83□□□□□ -2.12
CTSDP07339 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.83□□□□□ -2.12
CTSDP07339 AL359385.1-201ENST00000456509 365 ntBASIC1.83□□□□□ -2.12
CTSDP07339 RPS20P24-201ENST00000457473 361 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC090515.1-201ENST00000465295 476 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.83□□□□□ -2.12
CTSDP07339 VPS26AP1-201ENST00000483197 979 ntBASIC1.83□□□□□ -2.12
CTSDP07339 CBX3P3-201ENST00000508108 532 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC027309.2-201ENST00000520566 192 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CTSDP07339 NDUFS5P6-201ENST00000529136 295 ntBASIC1.83□□□□□ -2.12
CTSDP07339 MED28P6-201ENST00000558776 231 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC027176.1-201ENST00000560204 514 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.83□□□□□ -2.12
CTSDP07339 AL356280.1-201ENST00000603614 379 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC046143.2-201ENST00000609789 160 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC040168.1-201ENST00000623594 991 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AL513185.3-201ENST00000433335 1300 ntBASIC1.83□□□□□ -2.12
CTSDP07339 AC025263.3-201ENST00000622965 1396 ntBASIC1.83□□□□□ -2.12
CTSDP07339 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
CTSDP07339 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CTSDP07339 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 Z99496.1-201ENST00000469424 1477 ntBASIC1.82□□□□□ -2.12
CTSDP07339 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTSDP07339 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTSDP07339 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTSDP07339 HMGB1P5-201ENST00000255320 642 ntBASIC1.82□□□□□ -2.12
CTSDP07339 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTSDP07339 OR56A5-201ENST00000340110 738 ntBASIC1.82□□□□□ -2.12
CTSDP07339 ANKRD36P1-201ENST00000344424 659 ntBASIC1.82□□□□□ -2.12
CTSDP07339 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTSDP07339 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTSDP07339 SNORA67.4-201ENST00000384688 142 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AL355497.1-201ENST00000406262 551 ntBASIC1.82□□□□□ -2.12
CTSDP07339 U3.40-201ENST00000408706 208 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 AC005005.2-201ENST00000420779 380 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 MTND4P24-201ENST00000424002 397 ntBASIC1.82□□□□□ -2.12
CTSDP07339 NANOGP5-201ENST00000424456 877 ntBASIC1.82□□□□□ -2.12
CTSDP07339 MTCO1P39-201ENST00000426148 480 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 OR6K5P-201ENST00000447050 945 ntBASIC1.82□□□□□ -2.12
CTSDP07339 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 AL021397.1-201ENST00000451806 248 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 KLRA1P-201ENST00000503499 986 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC025755.1-201ENST00000521306 278 ntBASIC1.82□□□□□ -2.12
CTSDP07339 MTCYBP20-201ENST00000524239 1129 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AP001646.1-201ENST00000527936 915 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC087276.1-201ENST00000529659 480 ntBASIC1.82□□□□□ -2.12
CTSDP07339 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTSDP07339 LSM6P2-201ENST00000552208 177 ntBASIC1.82□□□□□ -2.12
CTSDP07339 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.82□□□□□ -2.12
CTSDP07339 LRRC37A5P-203ENST00000580181 585 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.82□□□□□ -2.12
CTSDP07339 MIR4448-201ENST00000584360 86 ntBASIC1.82□□□□□ -2.12
CTSDP07339 MIR5002-201ENST00000584713 97 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 AC012669.1-201ENST00000603209 283 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC055876.5-201ENST00000605667 259 ntBASIC1.82□□□□□ -2.12
CTSDP07339 AC009090.3-201ENST00000616553 565 ntBASIC1.82□□□□□ -2.12
CTSDP07339 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 AL353748.2-201ENST00000622148 471 ntBASIC1.82□□□□□ -2.12
CTSDP07339 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.82□□□□□ -2.12
CTSDP07339 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.82□□□□□ -2.12
CTSDP07339 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.81□□□□□ -2.12
CTSDP07339 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTSDP07339 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.81□□□□□ -2.12
CTSDP07339 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTSDP07339 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CTSDP07339 HSPE1P11-201ENST00000339579 310 ntBASIC1.81□□□□□ -2.12
CTSDP07339 Y_RNA.111-201ENST00000363248 100 ntBASIC1.81□□□□□ -2.12
CTSDP07339 U3.12-201ENST00000364498 214 ntBASIC1.81□□□□□ -2.12
CTSDP07339 RNA5SP138-201ENST00000365098 114 ntBASIC1.81□□□□□ -2.12
CTSDP07339 SNORD51.1-201ENST00000365405 77 ntBASIC1.81□□□□□ -2.12
CTSDP07339 UBE2V1P2-201ENST00000397758 440 ntBASIC1.81□□□□□ -2.12
CTSDP07339 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
CTSDP07339 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.81□□□□□ -2.12
CTSDP07339 TATDN1P1-201ENST00000414123 891 ntBASIC1.81□□□□□ -2.12
CTSDP07339 RPL7P30-201ENST00000420888 709 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms