Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX6O95475 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX6O95475 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.46□□□□□ -2.18
SIX6O95475 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX6O95475 UBE2L4-201ENST00000587688 464 ntBASIC1.46□□□□□ -2.18
SIX6O95475 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.46□□□□□ -2.18
SIX6O95475 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.46□□□□□ -2.18
SIX6O95475 AC073111.2-201ENST00000605657 1075 ntBASIC1.46□□□□□ -2.18
SIX6O95475 AC016252.1-201ENST00000609721 474 ntBASIC1.46□□□□□ -2.18
SIX6O95475 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.15-201ENST00000611544 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.16-201ENST00000613119 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.12-201ENST00000613778 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.20-201ENST00000613956 192 ntBASIC1.46□□□□□ -2.18
SIX6O95475 AL161629.2-201ENST00000615347 275 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.9-201ENST00000615427 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.11-201ENST00000616345 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.2-201ENST00000616535 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 AC025016.1-201ENST00000616746 682 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.3-201ENST00000617785 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.19-201ENST00000618602 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 RNU2-1-201ENST00000618664 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.6-201ENST00000619225 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.5-201ENST00000619465 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 U2.10-201ENST00000620268 191 ntBASIC1.46□□□□□ -2.18
SIX6O95475 UCA1.1-201ENST00000620952 75 ntBASIC1.46□□□□□ -2.18
SIX6O95475 AC006386.2-201ENST00000624491 75 ntBASIC1.46□□□□□ -2.18
SIX6O95475 AC012005.1-201ENST00000624575 75 ntBASIC1.46□□□□□ -2.18
SIX6O95475 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.46□□□□□ -2.18
SIX6O95475 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SIX6O95475 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SIX6O95475 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SIX6O95475 SNORA3A-201ENST00000364113 130 ntBASIC1.45□□□□□ -2.18
SIX6O95475 RNA5SP354-201ENST00000391247 136 ntBASIC1.45□□□□□ -2.18
SIX6O95475 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.45□□□□□ -2.18
SIX6O95475 OFD1P18Y-201ENST00000420889 959 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.45□□□□□ -2.18
SIX6O95475 AL034418.1-201ENST00000448675 860 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AC096751.1-202ENST00000502691 1067 ntBASIC1.45□□□□□ -2.18
SIX6O95475 PRELID3BP4-201ENST00000515476 571 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX6O95475 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SIX6O95475 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX6O95475 GTF2IP8-201ENST00000560687 584 ntBASIC1.45□□□□□ -2.18
SIX6O95475 MTCYBP28-201ENST00000566728 1132 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AC090751.1-201ENST00000566966 267 ntBASIC1.45□□□□□ -2.18
SIX6O95475 MIR4504-201ENST00000577413 92 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.45□□□□□ -2.18
SIX6O95475 AC005000.2-201ENST00000605468 310 ntBASIC1.45□□□□□ -2.18
SIX6O95475 SNORD14A-201ENST00000606526 91 ntBASIC1.45□□□□□ -2.18
SIX6O95475 MIR7106-201ENST00000612419 65 ntBASIC1.45□□□□□ -2.18
SIX6O95475 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.45□□□□□ -2.18
SIX6O95475 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SIX6O95475 AC073592.7-201ENST00000623659 507 ntBASIC1.45□□□□□ -2.18
SIX6O95475 MTCO1P4-201ENST00000520516 1409 ntBASIC1.45□□□□□ -2.18
SIX6O95475 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.45□□□□□ -2.18
SIX6O95475 AC103710.2-202ENST00000641454 2853 ntBASIC1.45□□□□□ -2.18
SIX6O95475 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SIX6O95475 RNU6-1249P-201ENST00000363237 111 ntBASIC1.44□□□□□ -2.18
SIX6O95475 SNORA38-201ENST00000363946 132 ntBASIC1.44□□□□□ -2.18
SIX6O95475 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SIX6O95475 SNORA48.2-201ENST00000390926 124 ntBASIC1.44□□□□□ -2.18
SIX6O95475 RNA5SP171-201ENST00000391071 115 ntBASIC1.44□□□□□ -2.18
SIX6O95475 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SIX6O95475 GSTA9P-201ENST00000406231 611 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.44□□□□□ -2.18
SIX6O95475 AC079780.1-201ENST00000428259 207 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AL445646.1-201ENST00000431784 216 ntBASIC1.44□□□□□ -2.18
SIX6O95475 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SIX6O95475 AC093155.1-201ENST00000440164 826 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC003989.2-201ENST00000440224 169 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC092155.2-201ENST00000454675 477 ntBASIC1.44□□□□□ -2.18
SIX6O95475 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX6O95475 NDUFB4P2-201ENST00000509515 391 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC067904.2-201ENST00000517322 1283 ntBASIC1.44□□□□□ -2.18
SIX6O95475 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.44□□□□□ -2.18
SIX6O95475 AC068339.2-201ENST00000534395 618 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
SIX6O95475 GLYCAM1-201ENST00000546596 285 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.44□□□□□ -2.18
SIX6O95475 AC104581.2-201ENST00000572227 430 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.44□□□□□ -2.18
SIX6O95475 AC068944.2-201ENST00000610373 403 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC135507.2-201ENST00000612443 309 ntBASIC1.44□□□□□ -2.18
SIX6O95475 AC005332.10-201ENST00000612725 619 ntBASIC1.44□□□□□ -2.18
SIX6O95475 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.44□□□□□ -2.18
SIX6O95475 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.44□□□□□ -2.18
SIX6O95475 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.43□□□□□ -2.18
SIX6O95475 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SIX6O95475 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
SIX6O95475 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SIX6O95475 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SIX6O95475 U8.3-201ENST00000363321 132 ntBASIC1.43□□□□□ -2.18
SIX6O95475 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SIX6O95475 OR1L1-202ENST00000373686 1083 ntBASIC1.43□□□□□ -2.18
SIX6O95475 RNU1-73P-201ENST00000383971 164 ntBASIC1.43□□□□□ -2.18
SIX6O95475 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SIX6O95475 PTGES3P2-201ENST00000407942 482 ntBASIC1.43□□□□□ -2.18
SIX6O95475 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.43□□□□□ -2.18
SIX6O95475 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms