Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC091152.2-201ENST00000591628 2569 ntBASIC3.94□□□□□ -1.78
MBD4O95243 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD4O95243 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.94□□□□□ -1.78
MBD4O95243 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MBD4O95243 SDAD1P2-201ENST00000441308 2028 ntBASIC3.94□□□□□ -1.78
MBD4O95243 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MBD4O95243 AC011460.1-201ENST00000636268 1834 ntBASIC3.93□□□□□ -1.78
MBD4O95243 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
MBD4O95243 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD4O95243 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 RPL7P26-201ENST00000333817 754 ntBASIC3.93□□□□□ -1.78
MBD4O95243 SNORA9-201ENST00000384215 133 ntBASIC3.93□□□□□ -1.78
MBD4O95243 U3.42-201ENST00000408746 214 ntBASIC3.93□□□□□ -1.78
MBD4O95243 PPP1R11P2-201ENST00000423543 382 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD4O95243 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 SNRPEP4-201ENST00000435815 279 ntBASIC3.93□□□□□ -1.78
MBD4O95243 HMGN2P20-201ENST00000437531 273 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AL831737.1-201ENST00000441288 271 ntBASIC3.93□□□□□ -1.78
MBD4O95243 MTND5P2-201ENST00000442927 1142 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MBD4O95243 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 AC072039.1-201ENST00000477611 581 ntBASIC3.93□□□□□ -1.78
MBD4O95243 RN7SL504P-201ENST00000494496 287 ntBASIC3.93□□□□□ -1.78
MBD4O95243 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 AC109464.2-201ENST00000510242 943 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.93□□□□□ -1.78
MBD4O95243 RNU6-1129P-201ENST00000515964 104 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD4O95243 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 HIGD1AP1-201ENST00000550979 275 ntBASIC3.93□□□□□ -1.78
MBD4O95243 TGIF1P1-201ENST00000558095 802 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD4O95243 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD4O95243 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 AC112187.2-201ENST00000604345 283 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AC004067.1-201ENST00000608733 700 ntBASIC3.93□□□□□ -1.78
MBD4O95243 XIST_intron.1-201ENST00000619444 68 ntBASIC3.93□□□□□ -1.78
MBD4O95243 PLCE1P1-201ENST00000622094 305 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AC110801.1-201ENST00000623590 212 ntBASIC3.93□□□□□ -1.78
MBD4O95243 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD4O95243 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MBD4O95243 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
MBD4O95243 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MBD4O95243 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
MBD4O95243 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.92□□□□□ -1.78
MBD4O95243 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MBD4O95243 RNU5A-2P-201ENST00000384337 116 ntBASIC3.92□□□□□ -1.78
MBD4O95243 MIR493-201ENST00000385254 89 ntBASIC3.92□□□□□ -1.78
MBD4O95243 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MBD4O95243 U3.19-201ENST00000390893 196 ntBASIC3.92□□□□□ -1.78
MBD4O95243 RNA5SP229-201ENST00000410809 99 ntBASIC3.92□□□□□ -1.78
MBD4O95243 RPS3AP12-201ENST00000443616 753 ntBASIC3.92□□□□□ -1.78
MBD4O95243 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.92□□□□□ -1.78
MBD4O95243 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.92□□□□□ -1.78
MBD4O95243 OR6K1P-201ENST00000456766 971 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AC092754.2-201ENST00000463506 460 ntBASIC3.92□□□□□ -1.78
MBD4O95243 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.92□□□□□ -1.78
MBD4O95243 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 PHBP14-201ENST00000512887 367 ntBASIC3.92□□□□□ -1.78
MBD4O95243 SNORA70.24-201ENST00000517233 118 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.92□□□□□ -1.78
MBD4O95243 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.92□□□□□ -1.78
MBD4O95243 AC022690.1-201ENST00000526681 550 ntBASIC3.92□□□□□ -1.78
MBD4O95243 MTATP6P15-201ENST00000527233 835 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AC013828.2-201ENST00000532487 235 ntBASIC3.92□□□□□ -1.78
MBD4O95243 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 MIR4474-201ENST00000579189 78 ntBASIC3.92□□□□□ -1.78
MBD4O95243 MIR3200-201ENST00000580767 85 ntBASIC3.92□□□□□ -1.78
MBD4O95243 MIR544B-201ENST00000582372 78 ntBASIC3.92□□□□□ -1.78
MBD4O95243 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
MBD4O95243 AC022146.1-201ENST00000595307 847 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AL109653.1-201ENST00000603091 248 ntBASIC3.92□□□□□ -1.78
MBD4O95243 YPEL5P2-201ENST00000605553 359 ntBASIC3.92□□□□□ -1.78
MBD4O95243 uc_338.1-201ENST00000612113 180 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AC002076.2-201ENST00000617362 122 ntBASIC3.92□□□□□ -1.78
MBD4O95243 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MBD4O95243 SNORD39.4-201ENST00000620099 78 ntBASIC3.92□□□□□ -1.78
MBD4O95243 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.92□□□□□ -1.78
MBD4O95243 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.92□□□□□ -1.78
MBD4O95243 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MBD4O95243 AC099063.3-201ENST00000642066 185 ntBASIC3.92□□□□□ -1.78
MBD4O95243 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MBD4O95243 CUL1P1-201ENST00000509510 2425 ntBASIC3.92□□□□□ -1.78
MBD4O95243 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MBD4O95243 AC008568.2-201ENST00000623862 2313 ntBASIC3.92□□□□□ -1.78
MBD4O95243 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
MBD4O95243 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
MBD4O95243 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 RNU5A-1-201ENST00000362698 116 ntBASIC3.91□□□□□ -1.78
MBD4O95243 RNU5E-8P-201ENST00000363502 116 ntBASIC3.91□□□□□ -1.78
MBD4O95243 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MBD4O95243 RNU6-516P-201ENST00000411381 104 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms