Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RPL7P37-201ENST00000425095 738 ntBASIC2.12□□□□□ -2.07
LTN1O94822 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.12□□□□□ -2.07
LTN1O94822 DNAJC19P4-201ENST00000440115 345 ntBASIC2.12□□□□□ -2.07
LTN1O94822 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.12□□□□□ -2.07
LTN1O94822 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.12□□□□□ -2.07
LTN1O94822 AP001029.3-201ENST00000588063 596 ntBASIC2.12□□□□□ -2.07
LTN1O94822 AC006023.2-201ENST00000609916 167 ntBASIC2.12□□□□□ -2.07
LTN1O94822 MIR6504-201ENST00000613520 61 ntBASIC2.12□□□□□ -2.07
LTN1O94822 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LTN1O94822 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LTN1O94822 RNU6-174P-201ENST00000410406 106 ntBASIC2.11□□□□□ -2.07
LTN1O94822 RNA5SP489-201ENST00000410986 109 ntBASIC2.11□□□□□ -2.07
LTN1O94822 RPS3AP9-201ENST00000417027 792 ntBASIC2.11□□□□□ -2.07
LTN1O94822 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.11□□□□□ -2.07
LTN1O94822 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
LTN1O94822 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.11□□□□□ -2.07
LTN1O94822 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.11□□□□□ -2.07
LTN1O94822 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.11□□□□□ -2.07
LTN1O94822 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.11□□□□□ -2.07
LTN1O94822 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
LTN1O94822 AC068714.1-201ENST00000559623 800 ntBASIC2.11□□□□□ -2.07
LTN1O94822 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.11□□□□□ -2.07
LTN1O94822 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LTN1O94822 MIR6779-201ENST00000617283 64 ntBASIC2.11□□□□□ -2.07
LTN1O94822 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
LTN1O94822 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LTN1O94822 SNORD48-201ENST00000364953 64 ntBASIC2.1□□□□□ -2.07
LTN1O94822 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LTN1O94822 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.1□□□□□ -2.07
LTN1O94822 HMGB1P27-201ENST00000431429 603 ntBASIC2.1□□□□□ -2.07
LTN1O94822 AL031659.1-201ENST00000447075 539 ntBASIC2.1□□□□□ -2.07
LTN1O94822 AL354943.1-201ENST00000572103 781 ntBASIC2.1□□□□□ -2.07
LTN1O94822 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.1□□□□□ -2.07
LTN1O94822 SNHG22-203ENST00000617833 660 ntBASIC2.1□□□□□ -2.07
LTN1O94822 AP003122.6-201ENST00000623831 495 ntBASIC2.1□□□□□ -2.07
LTN1O94822 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LTN1O94822 RNU1-57P-201ENST00000384491 166 ntBASIC2.1□□□□□ -2.07
LTN1O94822 RNU4-74P-201ENST00000411280 161 ntBASIC2.1□□□□□ -2.07
LTN1O94822 RNU2-71P-201ENST00000411395 189 ntBASIC2.1□□□□□ -2.07
LTN1O94822 HMGB3P2-201ENST00000411913 584 ntBASIC2.1□□□□□ -2.07
LTN1O94822 RPS15AP12-201ENST00000419498 388 ntBASIC2.1□□□□□ -2.07
LTN1O94822 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.1□□□□□ -2.07
LTN1O94822 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.1□□□□□ -2.07
LTN1O94822 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.1□□□□□ -2.07
LTN1O94822 BNIP3P2-201ENST00000441221 577 ntBASIC2.1□□□□□ -2.07
LTN1O94822 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.1□□□□□ -2.07
LTN1O94822 AC024614.2-201ENST00000577584 372 ntBASIC2.1□□□□□ -2.07
LTN1O94822 SNORA4-201ENST00000584302 138 ntBASIC2.1□□□□□ -2.07
LTN1O94822 DUXAP4-201ENST00000603046 613 ntBASIC2.1□□□□□ -2.07
LTN1O94822 AL158801.5-201ENST00000623123 465 ntBASIC2.1□□□□□ -2.07
LTN1O94822 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LTN1O94822 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LTN1O94822 RNU6-60P-201ENST00000364792 103 ntBASIC2.09□□□□□ -2.07
LTN1O94822 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.09□□□□□ -2.07
LTN1O94822 RPL30P3-201ENST00000424262 333 ntBASIC2.09□□□□□ -2.07
LTN1O94822 AC009238.1-201ENST00000442165 424 ntBASIC2.09□□□□□ -2.07
LTN1O94822 AC009237.6-201ENST00000446969 424 ntBASIC2.09□□□□□ -2.07
LTN1O94822 DPPA3P1-201ENST00000448050 469 ntBASIC2.09□□□□□ -2.07
LTN1O94822 RBM43P1-201ENST00000476891 1081 ntBASIC2.09□□□□□ -2.07
LTN1O94822 AC108734.3-201ENST00000481241 1165 ntBASIC2.09□□□□□ -2.07
LTN1O94822 RNU6-711P-201ENST00000517255 106 ntBASIC2.09□□□□□ -2.07
LTN1O94822 AC084851.1-201ENST00000529105 249 ntBASIC2.09□□□□□ -2.07
LTN1O94822 POLHP1-201ENST00000411806 470 ntBASIC2.08□□□□□ -2.08
LTN1O94822 PAICSP7-201ENST00000419829 962 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AC009237.2-201ENST00000421358 284 ntBASIC2.08□□□□□ -2.08
LTN1O94822 PIGFP3-201ENST00000441918 722 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.08□□□□□ -2.08
LTN1O94822 RPS15AP36-201ENST00000492022 382 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AC023050.1-201ENST00000498198 304 ntBASIC2.08□□□□□ -2.08
LTN1O94822 MTCO2P32-201ENST00000514865 403 ntBASIC2.08□□□□□ -2.08
LTN1O94822 RN7SKP40-201ENST00000517211 242 ntBASIC2.08□□□□□ -2.08
LTN1O94822 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LTN1O94822 APOOP1-201ENST00000604695 592 ntBASIC2.08□□□□□ -2.08
LTN1O94822 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LTN1O94822 AC092447.6-201ENST00000414578 210 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.08□□□□□ -2.08
LTN1O94822 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.08□□□□□ -2.08
LTN1O94822 RPS26P56-201ENST00000444468 240 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.08□□□□□ -2.08
LTN1O94822 SNORD53B-201ENST00000577887 78 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AP001180.3-201ENST00000582221 145 ntBASIC2.08□□□□□ -2.08
LTN1O94822 AC004241.3-201ENST00000611728 517 ntBASIC2.08□□□□□ -2.08
LTN1O94822 DUXAP9-208ENST00000622815 614 ntBASIC2.08□□□□□ -2.08
LTN1O94822 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LTN1O94822 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LTN1O94822 SNRPEP2-201ENST00000397592 279 ntBASIC2.07□□□□□ -2.08
LTN1O94822 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.07□□□□□ -2.08
LTN1O94822 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
LTN1O94822 RAC1P5-201ENST00000512182 576 ntBASIC2.07□□□□□ -2.08
LTN1O94822 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.07□□□□□ -2.08
LTN1O94822 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.07□□□□□ -2.08
LTN1O94822 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.07□□□□□ -2.08
LTN1O94822 MTND2P13-201ENST00000577438 1039 ntBASIC2.07□□□□□ -2.08
LTN1O94822 AL109653.1-201ENST00000603091 248 ntBASIC2.07□□□□□ -2.08
LTN1O94822 AL512598.1-201ENST00000610158 273 ntBASIC2.07□□□□□ -2.08
LTN1O94822 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.07□□□□□ -2.08
LTN1O94822 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LTN1O94822 AC098679.5-201ENST00000624394 571 ntBASIC2.07□□□□□ -2.08
LTN1O94822 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
LTN1O94822 SNORA7.1-201ENST00000363750 139 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms