Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.69□□□□□ -1.82
LDB2O43679 KLKP1-201ENST00000595979 403 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC245014.2-201ENST00000603689 287 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC246785.4-201ENST00000605374 287 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC121334.2-201ENST00000605387 271 ntBASIC3.69□□□□□ -1.82
LDB2O43679 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.69□□□□□ -1.82
LDB2O43679 BX664608.1-201ENST00000610519 487 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC105429.2-201ENST00000610567 517 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AL121772.2-201ENST00000614331 297 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC090517.2-201ENST00000614966 680 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AL158209.2-201ENST00000619266 216 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC068880.5-201ENST00000624331 290 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AC091925.2-201ENST00000625059 256 ntBASIC3.69□□□□□ -1.82
LDB2O43679 AP000553.6-201ENST00000641242 118 ntBASIC3.69□□□□□ -1.82
LDB2O43679 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
LDB2O43679 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB2O43679 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB2O43679 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 RNU6-761P-201ENST00000384148 107 ntBASIC3.68□□□□□ -1.82
LDB2O43679 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 MTHFD2P2-201ENST00000407725 247 ntBASIC3.68□□□□□ -1.82
LDB2O43679 RNU6-195P-201ENST00000411352 109 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC092832.1-201ENST00000422934 400 ntBASIC3.68□□□□□ -1.82
LDB2O43679 USP9YP18-201ENST00000425912 695 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB2O43679 AL358934.1-201ENST00000432346 324 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 RPL7P28-201ENST00000437739 740 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL049734.2-201ENST00000441066 616 ntBASIC3.68□□□□□ -1.82
LDB2O43679 NOTCH2P1-201ENST00000443481 624 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC112653.1-201ENST00000443851 386 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC079448.1-201ENST00000449377 373 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC003071.1-201ENST00000451219 789 ntBASIC3.68□□□□□ -1.82
LDB2O43679 FGF7P6-202ENST00000451282 293 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL353691.1-201ENST00000451332 387 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC104308.1-201ENST00000454621 333 ntBASIC3.68□□□□□ -1.82
LDB2O43679 SNRPGP5-201ENST00000456003 220 ntBASIC3.68□□□□□ -1.82
LDB2O43679 RBM43P1-201ENST00000476891 1081 ntBASIC3.68□□□□□ -1.82
LDB2O43679 HMGB1P29-201ENST00000505659 499 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB2O43679 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.68□□□□□ -1.82
LDB2O43679 OR8L1P-201ENST00000534005 955 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 AC123904.2-201ENST00000548059 300 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.68□□□□□ -1.82
LDB2O43679 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 AC244505.7-201ENST00000599675 272 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 AL606834.2-201ENST00000602954 668 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL365503.1-201ENST00000605247 905 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC006329.2-201ENST00000611491 394 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC090970.3-201ENST00000612566 866 ntBASIC3.68□□□□□ -1.82
LDB2O43679 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 AC079597.1-201ENST00000624306 508 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AL157786.1-207ENST00000627771 695 ntBASIC3.68□□□□□ -1.82
LDB2O43679 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
LDB2O43679 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LDB2O43679 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LDB2O43679 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.68□□□□□ -1.82
LDB2O43679 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LDB2O43679 AC011460.1-201ENST00000636268 1834 ntBASIC3.67□□□□□ -1.82
LDB2O43679 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
LDB2O43679 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 ELF2P3-201ENST00000445099 1506 ntBASIC3.67□□□□□ -1.82
LDB2O43679 RNA5SP124-201ENST00000362739 110 ntBASIC3.67□□□□□ -1.82
LDB2O43679 Y_RNA.554-201ENST00000384672 102 ntBASIC3.67□□□□□ -1.82
LDB2O43679 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LDB2O43679 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 AL391417.1-201ENST00000404100 426 ntBASIC3.67□□□□□ -1.82
LDB2O43679 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 AC245052.5-201ENST00000416320 649 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LDB2O43679 AC069157.1-201ENST00000421749 137 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC005517.2-201ENST00000424673 553 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB2O43679 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 UBE2V1P13-201ENST00000436983 439 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.67□□□□□ -1.82
LDB2O43679 AL358232.1-201ENST00000448030 501 ntBASIC3.67□□□□□ -1.82
LDB2O43679 RPL29P29-201ENST00000448725 423 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AL359385.1-201ENST00000456509 365 ntBASIC3.67□□□□□ -1.82
LDB2O43679 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.67□□□□□ -1.82
LDB2O43679 RPL21P103-201ENST00000479921 488 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms