Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.97□□□□□ -1.93
MSH4O15457 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 TRGVB-201ENST00000453257 471 ntBASIC2.97□□□□□ -1.93
MSH4O15457 RPL7P5-201ENST00000471472 736 ntBASIC2.97□□□□□ -1.93
MSH4O15457 RN7SL432P-201ENST00000484057 298 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC023424.2-201ENST00000493479 777 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC090453.1-201ENST00000495560 436 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.97□□□□□ -1.93
MSH4O15457 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
MSH4O15457 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MSH4O15457 AC005832.3-201ENST00000537929 631 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.97□□□□□ -1.93
MSH4O15457 COX6CP3-201ENST00000580869 223 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC015688.2-201ENST00000584523 262 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH4O15457 AL109653.1-201ENST00000603091 248 ntBASIC2.97□□□□□ -1.93
MSH4O15457 RPL12P50-201ENST00000603116 116 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AC080013.4-201ENST00000607624 649 ntBASIC2.97□□□□□ -1.93
MSH4O15457 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH4O15457 AC106028.5-201ENST00000610332 395 ntBASIC2.97□□□□□ -1.93
MSH4O15457 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.97□□□□□ -1.93
MSH4O15457 AL445984.1-201ENST00000637834 659 ntBASIC2.97□□□□□ -1.93
MSH4O15457 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
MSH4O15457 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
MSH4O15457 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
MSH4O15457 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.96□□□□□ -1.94
MSH4O15457 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.96□□□□□ -1.94
MSH4O15457 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
MSH4O15457 NACA3P-201ENST00000359690 648 ntBASIC2.96□□□□□ -1.94
MSH4O15457 RNU6-173P-201ENST00000364215 104 ntBASIC2.96□□□□□ -1.94
MSH4O15457 UBE2V1P2-201ENST00000397758 440 ntBASIC2.96□□□□□ -1.94
MSH4O15457 DHFRP6-201ENST00000401776 268 ntBASIC2.96□□□□□ -1.94
MSH4O15457 VN1R51P-201ENST00000411675 945 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC109780.2-201ENST00000413467 845 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.96□□□□□ -1.94
MSH4O15457 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AL354692.1-201ENST00000423044 315 ntBASIC2.96□□□□□ -1.94
MSH4O15457 OR2B8P-201ENST00000432841 938 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.96□□□□□ -1.94
MSH4O15457 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.96□□□□□ -1.94
MSH4O15457 snoU109.3-201ENST00000459477 145 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC011979.1-201ENST00000472300 483 ntBASIC2.96□□□□□ -1.94
MSH4O15457 MTCYBP17-201ENST00000503579 789 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.96□□□□□ -1.94
MSH4O15457 AC008837.2-201ENST00000513076 418 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC096725.1-201ENST00000514266 313 ntBASIC2.96□□□□□ -1.94
MSH4O15457 RNA5SP282-201ENST00000516355 108 ntBASIC2.96□□□□□ -1.94
MSH4O15457 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.96□□□□□ -1.94
MSH4O15457 CR383656.7-201ENST00000548164 174 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.96□□□□□ -1.94
MSH4O15457 AL022099.1-201ENST00000604551 712 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AL031176.1-201ENST00000604554 466 ntBASIC2.96□□□□□ -1.94
MSH4O15457 AC025588.4-201ENST00000615802 908 ntBASIC2.96□□□□□ -1.94
MSH4O15457 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
MSH4O15457 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.96□□□□□ -1.94
MSH4O15457 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 RNU6-413P-201ENST00000384115 107 ntBASIC2.95□□□□□ -1.94
MSH4O15457 MIR196B-201ENST00000384852 84 ntBASIC2.95□□□□□ -1.94
MSH4O15457 RNA5SP80-201ENST00000410475 111 ntBASIC2.95□□□□□ -1.94
MSH4O15457 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
MSH4O15457 RPLP0P7-201ENST00000416050 667 ntBASIC2.95□□□□□ -1.94
MSH4O15457 MTATP6P27-201ENST00000416987 621 ntBASIC2.95□□□□□ -1.94
MSH4O15457 UBE2D3P2-201ENST00000424409 445 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC007742.1-201ENST00000425789 329 ntBASIC2.95□□□□□ -1.94
MSH4O15457 EZH2P1-201ENST00000431167 291 ntBASIC2.95□□□□□ -1.94
MSH4O15457 NANOGP2-201ENST00000435391 727 ntBASIC2.95□□□□□ -1.94
MSH4O15457 ELOCP26-201ENST00000436067 329 ntBASIC2.95□□□□□ -1.94
MSH4O15457 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.95□□□□□ -1.94
MSH4O15457 MTCO3P11-201ENST00000455103 774 ntBASIC2.95□□□□□ -1.94
MSH4O15457 ARPC3P2-201ENST00000457786 533 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.95□□□□□ -1.94
MSH4O15457 AC091179.1-201ENST00000461606 579 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC114981.1-201ENST00000503897 678 ntBASIC2.95□□□□□ -1.94
MSH4O15457 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.95□□□□□ -1.94
MSH4O15457 MTND4LP22-201ENST00000508209 276 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.95□□□□□ -1.94
MSH4O15457 RNU4-29P-201ENST00000515943 174 ntBASIC2.95□□□□□ -1.94
MSH4O15457 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
MSH4O15457 RNU6-583P-201ENST00000516012 92 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.95□□□□□ -1.94
MSH4O15457 AC100870.1-201ENST00000522035 505 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AC022861.1-201ENST00000522981 663 ntBASIC2.95□□□□□ -1.94
MSH4O15457 HSPA8P13-201ENST00000523715 472 ntBASIC2.95□□□□□ -1.94
MSH4O15457 OR5AK1P-201ENST00000524837 922 ntBASIC2.95□□□□□ -1.94
MSH4O15457 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MSH4O15457 AL163153.1-201ENST00000554223 283 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AL391156.1-201ENST00000554965 554 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.95□□□□□ -1.94
MSH4O15457 MTCYBP23-201ENST00000558717 1102 ntBASIC2.95□□□□□ -1.94
MSH4O15457 AADACP1-206ENST00000561502 1193 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms