Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 Y_RNA.364-201ENST00000365532 101 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 RNU6-317P-201ENST00000384031 107 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 Y_RNA.530-201ENST00000384587 101 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 MIR200C-201ENST00000384980 68 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AL590290.1-201ENST00000405336 380 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 RPS20P5-201ENST00000434808 360 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 FABP5P14-201ENST00000437273 393 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 RPL23AP52-201ENST00000439311 478 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AL118520.1-201ENST00000450770 291 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 AC034222.1-201ENST00000494052 532 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 RNU6-976P-201ENST00000516086 111 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 RNU6-566P-201ENST00000516790 107 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 IMMP1LP2-201ENST00000552954 492 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 MIR3146-201ENST00000580367 79 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 PRPF19P1-201ENST00000584766 898 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 RPL7P50-201ENST00000600588 727 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.78□□□□□ -1.64
RFXAPO00287 HSPE1P14-201ENST00000605812 302 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AC012603.1-201ENST00000606424 528 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 CR392039.5-201ENST00000623201 510 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 AL732372.2-225ENST00000642124 456 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
RFXAPO00287 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 NAMPTP1-201ENST00000440465 2514 ntBASIC4.78□□□□□ -1.64
RFXAPO00287 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFXAPO00287 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
RFXAPO00287 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFXAPO00287 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 AC020633.1-201ENST00000468439 2247 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 FAM91A3P-201ENST00000456826 2544 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RFXAPO00287 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 SNORA63.1-201ENST00000362493 131 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 SNORA62.1-201ENST00000364287 154 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 RNA5SP130-201ENST00000364431 114 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AL606923.1-201ENST00000406616 190 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.77□□□□□ -1.65
RFXAPO00287 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 AC008280.1-201ENST00000418851 412 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AL445584.1-201ENST00000431451 330 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC007389.2-201ENST00000434630 306 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 YWHAZP8-201ENST00000436935 731 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.77□□□□□ -1.65
RFXAPO00287 AL035551.1-201ENST00000446931 348 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC005297.2-201ENST00000450430 606 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 NANOGP10-201ENST00000453325 895 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 Y_RNA.668-201ENST00000516233 93 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC009812.2-201ENST00000517657 457 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC087854.1-201ENST00000519706 414 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 AP000907.2-201ENST00000530827 353 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.77□□□□□ -1.65
RFXAPO00287 AC053481.4-201ENST00000583164 216 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.77□□□□□ -1.65
RFXAPO00287 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.77□□□□□ -1.65
RFXAPO00287 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.77□□□□□ -1.65
RFXAPO00287 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFXAPO00287 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 AC104623.2-202ENST00000623477 4002 ntBASIC4.77□□□□□ -1.65
RFXAPO00287 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RFXAPO00287 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.77□□□□□ -1.65
RFXAPO00287 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RFXAPO00287 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RFXAPO00287 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.76□□□□□ -1.65
RFXAPO00287 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFXAPO00287 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFXAPO00287 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RFXAPO00287 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RFXAPO00287 RNU6-1040P-201ENST00000383974 107 ntBASIC4.76□□□□□ -1.65
RFXAPO00287 RNY1P14-201ENST00000384426 108 ntBASIC4.76□□□□□ -1.65
RFXAPO00287 AC016769.3-201ENST00000396562 315 ntBASIC4.76□□□□□ -1.65
RFXAPO00287 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.76□□□□□ -1.65
RFXAPO00287 AL078604.1-201ENST00000404609 466 ntBASIC4.76□□□□□ -1.65
RFXAPO00287 AC048351.1-201ENST00000420064 602 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms