Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC084290.1-201ENST00000434995 374 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 MRPL50P4-201ENST00000446432 475 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 FTH1P25-201ENST00000447665 469 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC108938.1-201ENST00000451204 136 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 HMGN3P1-201ENST00000453847 193 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 BOLA3P3-201ENST00000505182 232 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 HPRT1P3-201ENST00000539521 576 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 SULT1C2P1-202ENST00000562418 459 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC131902.3-201ENST00000611767 581 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC002076.2-201ENST00000617362 122 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL512506.2-201ENST00000624472 458 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 ZNF663P-202ENST00000641770 1131 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 DBF4P1-201ENST00000412976 1892 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
TMX2-CTNND1H3BSU7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-492P-201ENST00000363035 104 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-560P-201ENST00000364007 108 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 U3.42-201ENST00000408746 214 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 ATG3P1-201ENST00000419507 911 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 DPRXP1-201ENST00000426312 460 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 USP9YP22-201ENST00000438971 294 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 CR769776.1-201ENST00000441254 787 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RPL7P36-201ENST00000444633 681 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 NDUFA5P7-201ENST00000452914 242 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP000705.1-201ENST00000454567 350 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 USP9YP25-201ENST00000457708 443 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 SNORD11.1-201ENST00000459482 85 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP001025.2-201ENST00000490908 477 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC021146.8-201ENST00000507455 733 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 MTCO2P32-201ENST00000514865 403 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU1-61P-201ENST00000516107 151 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-1225P-201ENST00000516336 65 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RN7SKP265-201ENST00000516448 223 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-1261P-201ENST00000517194 104 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 IGKV2D-36-201ENST00000518643 226 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 ARL2BPP5-201ENST00000523141 481 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AADACP1-206ENST00000561502 1193 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC138915.2-201ENST00000569776 97 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC091057.2-201ENST00000602594 792 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC008277.2-201ENST00000605196 797 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP001521.1-201ENST00000609150 300 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL355816.2-201ENST00000610049 647 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC004696.1-201ENST00000614345 607 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC231759.1-201ENST00000616455 597 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL049780.3-201ENST00000624612 1583 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC233263.6-201ENST00000631132 1963 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC130650.2-201ENST00000618736 2403 ntBASIC2.68□□□□□ -1.98
TMX2-CTNND1H3BSU7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 Y_RNA.192-201ENST00000363977 102 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNU6-413P-201ENST00000384115 107 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AL031679.1-201ENST00000400616 525 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 RNA5SP492-201ENST00000411330 114 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC073264.1-201ENST00000411508 416 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 ARL5AP4-201ENST00000430731 512 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AP000936.2-201ENST00000447151 681 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 RPL23AP11-201ENST00000475260 469 ntBASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.67□□□□□ -1.98
TMX2-CTNND1H3BSU7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms