Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.23□□□□□ -1.89
SYCE3A1L190 AC006378.2-201ENST00000623178 2476 ntBASIC3.23□□□□□ -1.89
SYCE3A1L190 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.23□□□□□ -1.89
SYCE3A1L190 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.23□□□□□ -1.89
SYCE3A1L190 AC092593.1-201ENST00000515413 1815 ntBASIC3.23□□□□□ -1.89
SYCE3A1L190 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYCE3A1L190 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYCE3A1L190 FAM35CP-201ENST00000554755 2470 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYCE3A1L190 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYCE3A1L190 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AL513175.2-201ENST00000422071 443 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 PPP1R11P2-201ENST00000423543 382 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.22□□□□□ -1.89
SYCE3A1L190 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.22□□□□□ -1.89
SYCE3A1L190 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AL358232.1-201ENST00000448030 501 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AC091153.1-201ENST00000466297 402 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 HSPE1P6-201ENST00000479457 291 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 WBP1LP4-201ENST00000505043 344 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.22□□□□□ -1.89
SYCE3A1L190 RNU6-798P-201ENST00000516912 103 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 RN7SKP272-201ENST00000516988 232 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 OR4T1P-201ENST00000554933 911 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AL355836.1-201ENST00000555951 870 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AP000787.2-201ENST00000604432 568 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYCE3A1L190 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.22□□□□□ -1.89
SYCE3A1L190 AL391834.2-201ENST00000609982 546 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC006213.4-201ENST00000616184 634 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC022306.3-201ENST00000619930 550 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.22□□□□□ -1.89
SYCE3A1L190 OR8B1P-202ENST00000641132 1178 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 MTCO1P12-201ENST00000414273 1543 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.22□□□□□ -1.89
SYCE3A1L190 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC087359.1-201ENST00000508335 1740 ntBASIC3.22□□□□□ -1.89
SYCE3A1L190 AC233263.6-201ENST00000631132 1963 ntBASIC3.21□□□□□ -1.89
SYCE3A1L190 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SYCE3A1L190 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.21□□□□□ -1.9
SYCE3A1L190 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 Y_RNA.192-201ENST00000363977 102 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 RNA5SP72-201ENST00000364442 117 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SYCE3A1L190 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SYCE3A1L190 RPL5P18-201ENST00000406671 891 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 MIR1284-201ENST00000408337 120 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.21□□□□□ -1.9
SYCE3A1L190 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.21□□□□□ -1.9
SYCE3A1L190 AL389915.1-201ENST00000422463 466 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AL953862.1-201ENST00000423016 168 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.21□□□□□ -1.9
SYCE3A1L190 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.21□□□□□ -1.9
SYCE3A1L190 ATP5F1P1-201ENST00000433775 569 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.21□□□□□ -1.9
SYCE3A1L190 RPL21P134-201ENST00000453468 483 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC234775.1-201ENST00000454247 670 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 RPL30P9-201ENST00000465586 330 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 RPL7P49-201ENST00000471402 708 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 RPL30P5-201ENST00000494923 336 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC134050.1-201ENST00000495088 933 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC021146.8-201ENST00000507455 733 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC109445.1-201ENST00000512356 383 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 MTATP6P9-201ENST00000515039 680 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.21□□□□□ -1.9
SYCE3A1L190 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 OR6C7P-201ENST00000547875 934 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC125611.2-201ENST00000551907 647 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 DNAJC8P1-201ENST00000554535 372 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC090695.1-201ENST00000561269 1222 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC023813.2-201ENST00000564321 469 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.21□□□□□ -1.9
SYCE3A1L190 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 AL158211.4-201ENST00000606988 584 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 AC131235.4-201ENST00000609288 620 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC244100.1-202ENST00000621554 382 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC099654.9-201ENST00000637055 678 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SYCE3A1L190 DDX43P2-201ENST00000604753 1354 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 AC091564.4-201ENST00000533934 2194 ntBASIC3.21□□□□□ -1.9
SYCE3A1L190 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCE3A1L190 AC011477.1-204ENST00000623416 1325 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 AL049781.1-201ENST00000623195 3585 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 SNORA9.2-201ENST00000365361 133 ntBASIC3.2□□□□□ -1.9
SYCE3A1L190 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SYCE3A1L190 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.2□□□□□ -1.9
SYCE3A1L190 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms