Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC009994.1-201ENST00000606889 253 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AC103710.3-201ENST00000608157 948 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 TUG1_1.1-201ENST00000610654 145 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AC002553.4-201ENST00000616896 331 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AL139089.1-201ENST00000620372 975 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AL732618.1-201ENST00000623251 301 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AC091905.1-201ENST00000624400 311 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AC110994.2-201ENST00000635481 492 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 AC116667.1-201ENST00000604855 2072 ntBASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PCDHGB1Q9Y5G3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RPL23AP57-201ENST00000332361 466 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU6-534P-201ENST00000364877 106 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 Y_RNA.453-201ENST00000384223 109 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORA11.1-201ENST00000408133 129 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP285-201ENST00000410137 318 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RPL7AP73-201ENST00000413490 353 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 ELOCP14-201ENST00000428070 331 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 ELOCP7-201ENST00000439968 331 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 MTCO3P18-201ENST00000440206 761 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 HSFY6P-201ENST00000445573 403 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 NANOGP10-201ENST00000453325 895 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 MTND2P24-201ENST00000453434 806 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGN3P1-201ENST00000453847 193 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC004801.2-202ENST00000463559 283 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC087312.1-201ENST00000471411 480 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RPS29P25-201ENST00000481709 171 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SL691P-201ENST00000494487 301 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC112204.1-201ENST00000502591 103 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGB1P29-201ENST00000505659 499 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORA67.7-201ENST00000516664 135 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 Y_RNA.704-201ENST00000516851 102 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP209-201ENST00000516888 304 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RN7SKP96-201ENST00000516948 297 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU6-1003P-201ENST00000517099 105 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AP003730.1-201ENST00000524605 285 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC090877.1-201ENST00000561418 344 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 HMGB1P33-201ENST00000563485 527 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC107954.1-201ENST00000565906 727 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR3158-1-201ENST00000583596 81 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AL353621.2-201ENST00000605340 133 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC080013.4-201ENST00000607624 649 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 PISRT1-201ENST00000626175 531 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 FARSBP1-201ENST00000435808 1778 ntBASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHGB1Q9Y5G3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC116096.1-201ENST00000566804 2314 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RNA5SP366-201ENST00000365454 123 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 U1.1-201ENST00000384101 164 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 SNORA51.6-201ENST00000384151 125 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RNU6-114P-201ENST00000384704 105 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 MIR649-201ENST00000384843 97 ntBASIC3.59□□□□□ -1.83
PCDHGB1Q9Y5G3 RPL7P25-201ENST00000404151 721 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms