Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 RNA5SP183-201ENST00000362452 119 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 Y_RNA.269-201ENST00000364685 89 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 Y_RNA.277-201ENST00000364754 102 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 MIR1178-201ENST00000408396 91 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 RNA5SP487-201ENST00000410186 122 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 BX510359.3-201ENST00000422168 306 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AL160275.3-201ENST00000423876 471 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 RPL23AP33-201ENST00000442301 452 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 VN1R105P-201ENST00000486595 910 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 SNORA70.11-201ENST00000515987 138 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 SNORA70.13-201ENST00000516116 138 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 SNORA31.6-201ENST00000516241 130 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC090151.1-201ENST00000520784 730 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 DEFB108E-201ENST00000524692 240 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC004584.2-201ENST00000570407 410 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 MIR4675-201ENST00000577898 77 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 MIR1269B-201ENST00000580405 75 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC010632.3-201ENST00000611377 369 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 CYP4F35P-202ENST00000636121 390 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC093849.1-201ENST00000563631 2209 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AC006484.1-201ENST00000435086 1884 ntBASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHGC4Q9Y5F7 AL359854.1-201ENST00000614203 1594 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 MIR105-1-201ENST00000385222 81 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 MIR1286-201ENST00000408112 78 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 EI24P4-201ENST00000423683 1078 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 MTCO3P29-201ENST00000432119 779 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 Y_RNA.644-201ENST00000459006 113 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 RNU6-390P-201ENST00000516259 103 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 Y_RNA.674-201ENST00000516362 113 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 RN7SKP82-201ENST00000516786 223 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 RNU6-677P-201ENST00000516914 101 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 IGKV2-23-201ENST00000518729 323 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC007619.2-201ENST00000605743 379 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 BX284668.6-201ENST00000606899 438 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC211433.2-201ENST00000608433 387 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC008758.3-201ENST00000507003 1829 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 DDX10P1-201ENST00000448545 1933 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AL121839.2-201ENST00000565058 6943 ntBASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGC4Q9Y5F7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 HSPA8P1-201ENST00000425843 1833 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 RNU6-171P-201ENST00000384354 107 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 SNORA67-201ENST00000384423 137 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 RNU11-201ENST00000387069 134 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 AL590704.1-201ENST00000402856 794 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 REREP1Y-201ENST00000422655 198 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 EIF4EP2-201ENST00000422816 654 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 AC073063.1-201ENST00000434352 607 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 REREP2Y-201ENST00000439103 200 ntBASIC5.37□□□□□ -1.55
PCDHGC4Q9Y5F7 RPS11P7-201ENST00000442125 465 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms