Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 MIR3614-201ENST00000581261 86 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AL360012.1-201ENST00000602813 131 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-6P-201ENST00000606623 107 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 AL049539.1-201ENST00000611964 459 ntBASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB3Q9Y5E6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC024651.2-201ENST00000562480 2098 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 MIR569-201ENST00000385228 96 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 SNORA17A-201ENST00000391185 133 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC013442.1-201ENST00000397347 228 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 RNU2-52P-201ENST00000410680 190 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 CFL1P1-202ENST00000432948 411 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AL391987.1-201ENST00000441025 200 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC005077.1-201ENST00000449226 375 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 RANP2-201ENST00000456833 229 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC022493.1-201ENST00000492984 337 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 SUMO2P6-201ENST00000505273 288 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 SNORA27.4-201ENST00000516650 95 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AP005660.1-201ENST00000522972 293 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 SNORA17.5-201ENST00000630429 132 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 AC233981.2-201ENST00000611524 1614 ntBASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PCDHB3Q9Y5E6 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNU1-134P-201ENST00000362935 165 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-249P-201ENST00000363016 102 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 Y_RNA.218-201ENST00000364218 104 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-21P-201ENST00000384710 107 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNA5SP156-201ENST00000410250 110 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 SNORD56-201ENST00000413522 71 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AL590399.2-201ENST00000427536 309 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AL354710.1-201ENST00000453641 246 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 PPIAP19-201ENST00000486414 492 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AC097462.2-201ENST00000504623 481 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RN7SKP238-201ENST00000516483 249 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNA5SP434-201ENST00000516647 121 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RNU6-612P-201ENST00000516909 102 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AL512624.1-201ENST00000613638 469 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 AL450472.3-201ENST00000615578 367 ntBASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
PCDHB3Q9Y5E6 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 AL355834.1-201ENST00000556602 3965 ntBASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.9□□□□□ -1.47
PCDHB3Q9Y5E6 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.262-201ENST00000364641 102 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 RN7SKP69-201ENST00000365390 305 ntBASIC5.89□□□□□ -1.47
PCDHB3Q9Y5E6 MIR135A2-201ENST00000384854 100 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms