Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RN7SL807P-201ENST00000470923 297 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC104685.1-201ENST00000502445 371 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC017037.2-201ENST00000513850 890 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 SNORA70.16-201ENST00000516390 95 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 COX6CP3-201ENST00000580869 223 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 MIR5195-201ENST00000583555 115 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC073657.2-201ENST00000605661 303 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL442067.2-201ENST00000614033 363 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL157817.1-201ENST00000614264 790 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL590099.1-201ENST00000615276 138 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL138880.2-201ENST00000616214 239 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC021755.4-201ENST00000616620 456 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC009159.2-201ENST00000617603 606 ntBASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATG4BQ9Y4P1 AC007256.1-201ENST00000392253 2765 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-777P-201ENST00000364265 104 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 Y_RNA.234-201ENST00000364409 97 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-805P-201ENST00000365643 106 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SNORA1.3-201ENST00000384676 136 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 RNA5SP107-201ENST00000411358 122 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC109780.2-201ENST00000413467 845 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SSXP9-201ENST00000417503 292 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AL117351.1-201ENST00000438864 766 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC115115.1-201ENST00000449927 248 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 BX510359.1-201ENST00000456973 237 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC108860.1-201ENST00000484521 383 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 HMGB1P36-201ENST00000487709 576 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC147055.4-201ENST00000504399 745 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-528P-201ENST00000516926 100 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC104027.1-201ENST00000521887 300 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC055876.1-202ENST00000567053 138 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 CKS1BP3-201ENST00000600888 237 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AL596327.1-201ENST00000603629 213 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC106900.2-201ENST00000604994 317 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 MIR6076-201ENST00000617521 113 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC007490.1-201ENST00000624321 703 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 AC073476.4-201ENST00000628409 72 ntBASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
ATG4BQ9Y4P1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 MTND5P27-201ENST00000428871 1720 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SNORD113-6-201ENST00000363345 75 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 RNU6-931P-201ENST00000363850 107 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 SNORA9-201ENST00000384215 133 ntBASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
ATG4BQ9Y4P1 PIGPP2-201ENST00000411569 458 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms