Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ST13P14-201ENST00000474095 734 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC004808.1-201ENST00000627671 721 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 RNU6-234P-201ENST00000365229 104 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 MIR601-201ENST00000385256 79 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 RNU6-564P-201ENST00000410983 104 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 SETP8-201ENST00000435341 628 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 RNA5SP93-201ENST00000362525 114 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC006960.1-201ENST00000419980 153 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 FAR1P1-201ENST00000427163 934 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 RPL23AP20-201ENST00000447965 421 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC012181.1-201ENST00000479895 423 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 NPM1P28-201ENST00000492269 840 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC074029.2-201ENST00000551045 634 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 AC068790.3-201ENST00000602988 553 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 MIR496-201ENST00000385226 102 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 RNA5SP104-201ENST00000410989 118 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 IPO7P1-201ENST00000442031 636 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
MACF1Q9UPN3 OR11H5P-202ENST00000641612 1325 ntBASIC0.83□□□□□ -2.28
MACF1Q9UPN3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU1-133P-201ENST00000364867 167 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU6-360P-201ENST00000390944 104 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPS20P25-201ENST00000412447 352 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 HMGB1P26-201ENST00000452520 628 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC104229.1-201ENST00000561364 255 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC008173.1-201ENST00000418901 264 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPS15AP6-201ENST00000420703 385 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC021146.1-201ENST00000511202 716 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 PSMA6P4-201ENST00000603247 718 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC244517.12-201ENST00000623581 663 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 ZNF680P1-201ENST00000436625 1469 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC100870.1-201ENST00000522035 505 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 MIR198-201ENST00000637333 62 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 LINC02555-201ENST00000563933 1951 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 USP12PY-201ENST00000427677 1064 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU6-953P-201ENST00000459154 107 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU6-758P-201ENST00000516292 89 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 PTP4A1P6-201ENST00000531034 478 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 OR1AB1P-201ENST00000585564 761 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AL020991.1-201ENST00000612314 373 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU6-716P-201ENST00000365621 103 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 Y_RNA.428-201ENST00000384078 102 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPL21P24-201ENST00000413752 448 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 MRPL50P4-201ENST00000446432 475 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPL21P39-201ENST00000463605 483 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPL21P6-201ENST00000479171 504 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 HPVC1-201ENST00000629899 1198 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RNU1-100P-201ENST00000365255 165 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 Z98941.1-201ENST00000407764 100 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 CDC42P1-201ENST00000456658 548 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 HMGN1P7-201ENST00000491722 313 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC096745.1-201ENST00000509945 370 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 AC138627.2-201ENST00000624202 601 ntBASIC0.82□□□□□ -2.28
MACF1Q9UPN3 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC0.82□□□□□ -2.28
MACF1Q9UPN3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms