Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AL137003.2-201ENST00000606924 2538 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 RNU6-552P-201ENST00000362869 119 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 Y_RNA.231-201ENST00000364358 102 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 RNU6-903P-201ENST00000391270 109 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AL365400.1-201ENST00000431854 640 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 MTND3P16-201ENST00000452205 344 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 SCARNA10-201ENST00000459255 330 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC010631.1-201ENST00000474150 156 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC103843.2-201ENST00000530523 682 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC136624.4-201ENST00000573044 370 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AL139395.1-201ENST00000603662 160 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC128687.2-201ENST00000609657 566 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AC125257.1-201ENST00000560400 2930 ntBASIC5.24□□□□□ -1.57
DDX41Q9UJV9 AL365440.1-201ENST00000436135 2167 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC139713.2-215ENST00000641428 5037 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 TAB3P1-202ENST00000452645 1634 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 RNU6-188P-201ENST00000364207 107 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 SNORA70.2-201ENST00000364506 135 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 SNORA71.2-201ENST00000364941 134 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AL359634.1-202ENST00000404721 284 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 RNU4-26P-201ENST00000410270 107 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 RPL7AP73-201ENST00000413490 353 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 SSXP9-201ENST00000417503 292 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 ERLEC1P1-201ENST00000433806 578 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC090774.1-201ENST00000435925 246 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 SNRPFP3-201ENST00000457792 225 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 RPL23AP11-201ENST00000475260 469 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC025164.1-201ENST00000496249 478 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC004062.1-201ENST00000509926 645 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 TOMM20P2-201ENST00000540082 421 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 PARP1P2-201ENST00000556806 195 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 MIR4703-201ENST00000577728 79 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 VN1R80P-201ENST00000597126 338 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AP001486.3-201ENST00000615334 372 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 AL645937.1-201ENST00000641739 1652 ntBASIC5.23□□□□□ -1.57
DDX41Q9UJV9 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
DDX41Q9UJV9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 RNU6-1287P-201ENST00000362914 107 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 Y_RNA.166-201ENST00000363730 102 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 SNORA24.1-201ENST00000384401 135 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 RNU6-1060P-201ENST00000384664 107 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 MIR659-201ENST00000384963 97 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 MIR93-201ENST00000385024 80 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC110754.1-201ENST00000399740 601 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 Z98745.1-201ENST00000402553 494 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 RNU4-25P-201ENST00000410569 230 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 VDAC1P9-201ENST00000412766 841 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 ARL5AP1-201ENST00000418991 388 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 DUTP6-201ENST00000425573 462 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 CALM2P2-201ENST00000428512 440 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC023050.3-201ENST00000541142 333 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 215.1 ms