Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC096745.1-201ENST00000509945 370 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 BNIP3P1-201ENST00000547295 580 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 CYCSP40-201ENST00000575927 294 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AC005899.2-201ENST00000584353 90 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AL359547.2-201ENST00000615810 418 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 MIR4496-201ENST00000635896 61 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AL596275.2-204ENST00000641628 552 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AL596275.2-206ENST00000641957 626 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AL672167.1-205ENST00000641112 3080 ntBASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL4Q9UJQ4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNU6-379P-201ENST00000363813 104 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNU6-26P-201ENST00000383985 107 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNU6-146P-201ENST00000384602 108 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNU6-821P-201ENST00000390995 107 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 MIR1271-201ENST00000408537 86 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNA5SP296-201ENST00000410523 111 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RPS23P10-201ENST00000416185 486 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RPS26P47-201ENST00000427219 348 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC008065.1-201ENST00000428525 348 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AL591704.1-201ENST00000432574 275 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RPS29P9-201ENST00000440360 171 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AL589765.3-201ENST00000446084 462 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 HMGB3P30-201ENST00000457863 606 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 SNORD5.1-201ENST00000458800 75 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC117503.1-201ENST00000472241 394 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC103987.1-201ENST00000473394 348 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC087385.1-201ENST00000475062 312 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RPS18P6-201ENST00000476880 458 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 RNA5SP249-201ENST00000516127 99 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC092447.9-201ENST00000603395 144 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC018889.1-201ENST00000605372 397 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 HMGB1P24-202ENST00000615653 685 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC067931.1-201ENST00000624190 671 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AL359893.1-201ENST00000447628 1580 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 AC104118.1-201ENST00000607625 1589 ntBASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SALL4Q9UJQ4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 Y_RNA.152-201ENST00000363578 100 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RNU1-43P-201ENST00000365052 165 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RNU6-95P-201ENST00000384697 107 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 MIR600-201ENST00000385007 98 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 CYB5AP4-201ENST00000396692 399 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 CKS1BP6-201ENST00000424932 240 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RPL23AP33-201ENST00000442301 452 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RPL7L1P1-201ENST00000448259 785 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AF213884.1-201ENST00000488102 463 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RPL7P23-201ENST00000493874 747 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RN7SL808P-201ENST00000496066 299 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RNU6-390P-201ENST00000516259 103 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 SCARNA16.2-201ENST00000516520 172 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 Y_RNA.689-201ENST00000516589 107 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AC022790.1-201ENST00000522872 204 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AL034351.1-201ENST00000605288 668 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 U2.1-201ENST00000618978 145 ntBASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SALL4Q9UJQ4 AC009643.2-201ENST00000603543 1448 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms