Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL590365.1-201ENST00000450788 243 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 HMGN2P7-201ENST00000456186 273 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 MTCO1P42-201ENST00000457379 726 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 SNORD42A-201ENST00000459584 64 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 RPL23AP92-201ENST00000603609 255 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AL513477.2-201ENST00000607858 568 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC012531.5-201ENST00000611375 151 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC013476.2-201ENST00000614456 459 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC004009.2-201ENST00000623016 728 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 DCAF13P1-201ENST00000495256 1330 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.66□□□□□ -1.82
SIX4Q9UIU6 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 AC092447.7-201ENST00000422212 1621 ntBASIC3.66□□□□□ -1.82
SIX4Q9UIU6 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 AL513302.2-201ENST00000562313 1842 ntBASIC3.65□□□□□ -1.82
SIX4Q9UIU6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.82
SIX4Q9UIU6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 MIR208A-201ENST00000362287 71 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RNU6-730P-201ENST00000383954 104 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 Y_RNA.516-201ENST00000384541 124 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RNU6-248P-201ENST00000410720 107 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 MTCO1P17-201ENST00000411522 491 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RPL31P2-201ENST00000413849 377 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 PSMA6P3-201ENST00000428242 164 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AL590233.1-201ENST00000430017 456 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 MTCYBP45-201ENST00000435243 565 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC127537.2-201ENST00000439258 465 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RPL7P36-201ENST00000444633 681 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 Z82190.1-201ENST00000454534 490 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 SRRM1P2-201ENST00000464531 1192 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 KLF3P2-201ENST00000465138 268 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC087312.1-201ENST00000471411 480 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 TMED11P-201ENST00000479478 690 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 HSPD1P15-201ENST00000505573 1122 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RPL37P25-201ENST00000507308 276 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC109464.2-201ENST00000510242 943 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 MIR2114-201ENST00000516645 80 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 OR4R3P-201ENST00000525084 838 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC024224.1-201ENST00000538284 609 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC245505.1-201ENST00000556398 224 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC007566.2-201ENST00000603642 413 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC112191.3-201ENST00000604371 277 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC131902.3-201ENST00000611767 581 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 AC027514.1-201ENST00000588561 1603 ntBASIC3.65□□□□□ -1.83
SIX4Q9UIU6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SIX4Q9UIU6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 RNU6-517P-201ENST00000384362 110 ntBASIC3.64□□□□□ -1.83
SIX4Q9UIU6 Y_RNA.598-201ENST00000410480 95 ntBASIC3.64□□□□□ -1.83
SIX4Q9UIU6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.64□□□□□ -1.83
SIX4Q9UIU6 AMD1P2-201ENST00000412936 992 ntBASIC3.64□□□□□ -1.83
SIX4Q9UIU6 USP9YP13-201ENST00000417797 480 ntBASIC3.64□□□□□ -1.83
SIX4Q9UIU6 AIMP1P1-201ENST00000418670 937 ntBASIC3.64□□□□□ -1.83
SIX4Q9UIU6 MTCO2P5-201ENST00000422621 426 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms