Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 SNORA70E-201ENST00000384492 135 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-248P-201ENST00000410720 107 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RNA5SP31-201ENST00000411144 127 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 HMGB3P23-201ENST00000414981 585 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AP000907.1-201ENST00000428428 510 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AL590233.1-201ENST00000430017 456 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC127537.2-201ENST00000439258 465 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 Z82190.1-201ENST00000454534 490 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 RN7SL594P-201ENST00000470590 287 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC078785.3-201ENST00000476607 425 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC021205.2-201ENST00000480069 347 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 LARP1BP2-201ENST00000486594 519 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC138853.1-201ENST00000503549 823 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC005921.1-201ENST00000510589 286 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC016957.1-201ENST00000534895 309 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF519P3-201ENST00000557158 1032 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 MIR3913-1-201ENST00000577744 102 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AP001094.1-201ENST00000579805 193 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AL020997.2-201ENST00000602607 184 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC112191.3-201ENST00000604371 277 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AL513477.2-201ENST00000607858 568 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC131902.3-201ENST00000611767 581 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC008250.2-201ENST00000615261 205 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC068137.3-201ENST00000639191 341 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 AC073869.6-201ENST00000640656 341 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMARCAL1Q9NZC9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RNU1-64P-201ENST00000365443 163 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RN7SKP159-201ENST00000410657 292 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 MTATP6P27-201ENST00000416987 621 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 MTCO2P5-201ENST00000422621 426 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC007742.1-201ENST00000425789 329 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 ELOCP26-201ENST00000436067 329 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 HMGB3P8-201ENST00000449709 577 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC007537.2-201ENST00000472093 511 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RPL7P47-201ENST00000497299 556 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 UBE2CP3-201ENST00000502715 450 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC093677.1-201ENST00000514414 678 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RN7SKP298-201ENST00000515950 94 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 IGKV2D-36-201ENST00000518643 226 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC022878.1-201ENST00000530684 149 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 BNIP3P5-201ENST00000562290 498 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC137800.2-201ENST00000574375 120 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC009977.1-201ENST00000586015 570 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AC011978.2-201ENST00000569835 2054 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 CCT4P2-201ENST00000233836 1548 ntBASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMARCAL1Q9NZC9 AL049780.3-201ENST00000624612 1583 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-28P-201ENST00000362378 107 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 SNORD9-201ENST00000362566 104 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-730P-201ENST00000383954 104 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-259P-201ENST00000383999 107 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 HSPE1P26-201ENST00000405341 275 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 RN7SKP202-201ENST00000410439 330 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 CYCSP19-201ENST00000411715 316 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC009237.5-201ENST00000414271 501 ntBASIC3.63□□□□□ -1.83
SMARCAL1Q9NZC9 AC012065.2-201ENST00000421295 375 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms