Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MTCO3P24-201ENST00000572729 782 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 MTCYBP33-201ENST00000575007 1130 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 RSL24D1P11-201ENST00000591045 491 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AL390208.1-201ENST00000605885 644 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 ZYXP1-201ENST00000617638 118 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC040168.1-201ENST00000623594 991 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC139792.2-201ENST00000624218 587 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC091903.1-201ENST00000624322 454 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 AC068137.4-201ENST00000638485 296 ntBASIC3.18□□□□□ -1.9
NDE1Q9NXR1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
NDE1Q9NXR1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNU5F-6P-201ENST00000362979 116 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 U3.29-201ENST00000391296 212 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNA5SP317-201ENST00000410176 116 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RN7SKP156-201ENST00000410308 342 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNU2-15P-201ENST00000410692 191 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNU4-78P-201ENST00000410940 126 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RN7SKP142-201ENST00000411236 328 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNA5SP311-201ENST00000411290 116 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC007742.1-201ENST00000425789 329 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AL445669.1-201ENST00000426743 755 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AL117339.2-201ENST00000430475 180 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 ELOCP26-201ENST00000436067 329 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 HMGN2P20-201ENST00000437531 273 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC114755.5-201ENST00000447760 831 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 MTND1P29-201ENST00000448112 647 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RPL23AP55-201ENST00000498163 452 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC010424.1-201ENST00000506336 297 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 FCF1P8-201ENST00000510322 597 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 TMEM248P1-201ENST00000510579 951 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC093853.1-201ENST00000515689 483 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNU6-27P-201ENST00000516146 107 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNA5SP315-201ENST00000516340 116 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RNA5SP312-201ENST00000517068 116 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 PCMTD1P2-201ENST00000565017 355 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 MIR544B-201ENST00000582372 78 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RPL23AP92-201ENST00000603609 255 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC067959.1-201ENST00000604334 379 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC090186.1-201ENST00000605991 572 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 HMGN2P28-201ENST00000606102 262 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 RN7SKP299-201ENST00000606679 301 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC034229.5-201ENST00000624258 185 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AC084035.1-201ENST00000634543 607 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 PABPC1P7-201ENST00000413177 1513 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 AL390237.1-201ENST00000404226 1415 ntBASIC3.17□□□□□ -1.9
NDE1Q9NXR1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NDE1Q9NXR1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 RNA5SP515-201ENST00000364570 118 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 U8.14-201ENST00000390843 143 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL355379.1-201ENST00000405542 640 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 MTATP6P27-201ENST00000416987 621 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 RPL21P112-201ENST00000434403 463 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL590399.6-201ENST00000446396 307 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 COX6CP12-201ENST00000446748 202 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 RPL29P29-201ENST00000448725 423 ntBASIC3.16□□□□□ -1.9
NDE1Q9NXR1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms