Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ATG3Q9NT62 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
ATG3Q9NT62 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG3Q9NT62 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
ATG3Q9NT62 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG3Q9NT62 RNU1-14P-201ENST00000362759 152 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 RNU6-108P-201ENST00000365558 107 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 RNU6-146P-201ENST00000384602 108 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 Y_RNA.557-201ENST00000384680 107 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL359634.1-202ENST00000404721 284 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 RNA5SP36-201ENST00000410197 133 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 HMGB3P2-201ENST00000411913 584 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC009237.10-201ENST00000414112 510 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC127526.1-201ENST00000417526 366 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 COX6B1P7-201ENST00000430845 235 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL160004.2-201ENST00000432935 350 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL356276.2-201ENST00000435919 558 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 RPS26P2-201ENST00000440331 348 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL049734.2-201ENST00000441066 616 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL591623.2-201ENST00000449978 222 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 Y_RNA.635-201ENST00000459041 101 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL163973.1-201ENST00000484753 577 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 TMEM248P1-201ENST00000510579 951 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 Y_RNA.665-201ENST00000516177 98 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AP003072.2-201ENST00000527756 676 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AP000889.2-201ENST00000532684 490 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC010653.1-201ENST00000571108 881 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 RN7SL703P-201ENST00000578485 302 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AC011468.4-201ENST00000603942 409 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 MIR6875-201ENST00000617506 72 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL596275.2-204ENST00000641628 552 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 AL596275.2-206ENST00000641957 626 ntBASIC5.62□□□□□ -1.51
ATG3Q9NT62 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG3Q9NT62 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ATG3Q9NT62 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
ATG3Q9NT62 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 Y_RNA.112-201ENST00000363250 102 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 Y_RNA.149-201ENST00000363558 117 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 RNU2-28P-201ENST00000410457 189 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 RNU6-847P-201ENST00000411115 108 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AL451062.2-201ENST00000427515 271 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 RPL12P46-201ENST00000436610 195 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AL162151.2-201ENST00000448875 158 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC073415.1-201ENST00000449240 153 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 MTCO3P10-201ENST00000455912 772 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC107222.1-201ENST00000510899 637 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC099522.1-202ENST00000514718 367 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 AL161670.1-201ENST00000554348 137 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC090337.1-201ENST00000579651 2074 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 HMGB2P1-201ENST00000591146 634 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 FAM27D1-201ENST00000612308 341 ntBASIC5.61□□□□□ -1.51
ATG3Q9NT62 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.61□□□□□ -1.51
ATG3Q9NT62 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
ATG3Q9NT62 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 NXPH1-205ENST00000602349 1953 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 RLIMP1-201ENST00000339626 1680 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.6□□□□□ -1.51
ATG3Q9NT62 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL133243.3-201ENST00000617415 3004 ntBASIC5.6□□□□□ -1.51
ATG3Q9NT62 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ATG3Q9NT62 AL512646.1-201ENST00000269395 1077 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms