Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 SNORD121B-201ENST00000458838 81 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 NAP1L1P3-201ENST00000462291 880 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 FTH1P2-201ENST00000466086 412 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC007182.2-201ENST00000489251 402 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 MIR4299-201ENST00000577899 72 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC124283.4-201ENST00000581815 456 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 VN1R92P-201ENST00000598511 928 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC040174.2-201ENST00000602701 465 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AC068790.3-201ENST00000602988 553 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AL355812.1-201ENST00000603215 216 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 HSPE1P7-201ENST00000604681 321 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 MIR6864-201ENST00000617935 70 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 AL022578.1-201ENST00000439330 1433 ntBASIC1.29□□□□□ -2.2
SMCO4Q9NRQ5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 MIR320A-201ENST00000385302 82 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 RPS4XP8-201ENST00000402039 771 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL356432.1-201ENST00000405809 419 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL445183.3-201ENST00000414168 502 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 SEPT2P1-201ENST00000419651 180 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 NUP35P1-201ENST00000422734 947 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC009414.1-201ENST00000427200 443 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC004383.1-201ENST00000438135 289 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL513321.1-201ENST00000441175 761 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 TPMTP4-201ENST00000450749 678 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 MTCO3P11-201ENST00000455103 774 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 SNORA31.25-201ENST00000517242 134 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AP005639.2-201ENST00000527592 928 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 MTCYBP23-201ENST00000558717 1102 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC026464.5-201ENST00000562497 722 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL391834.1-201ENST00000609609 560 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC109454.4-201ENST00000623411 649 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 AL356473.1-201ENST00000406203 1408 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 CR848007.1-201ENST00000442354 1699 ntBASIC1.28□□□□□ -2.2
SMCO4Q9NRQ5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
SMCO4Q9NRQ5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 RNU6-19P-201ENST00000384718 107 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 RNA5SP354-201ENST00000391247 136 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 FCF1P2-201ENST00000415284 583 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC003685.2-201ENST00000422795 395 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 RPL7P44-201ENST00000424827 742 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AL353689.1-201ENST00000438895 199 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 HSPE1P24-201ENST00000450782 238 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC010099.1-201ENST00000455434 375 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 CAB39P1-201ENST00000502277 460 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 MTCYBP17-201ENST00000503579 789 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 RNU6-928P-201ENST00000516876 104 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC084851.1-201ENST00000529105 249 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 RANP3-201ENST00000530970 276 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC074029.1-201ENST00000552531 1044 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 YWHAEP7-203ENST00000622054 312 ntBASIC1.27□□□□□ -2.21
SMCO4Q9NRQ5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 GNG5P1-201ENST00000255500 204 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 MIR147B-201ENST00000390185 80 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 RPS3AP25-201ENST00000411660 793 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AL513175.1-201ENST00000431492 780 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 VN1R108P-201ENST00000431580 830 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AL109933.2-201ENST00000452651 260 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC092798.1-201ENST00000458542 409 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC021146.2-201ENST00000504736 556 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 ATP5F1P5-201ENST00000526403 760 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 CBX3P7-201ENST00000532876 502 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC026790.2-201ENST00000606282 430 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 MIR7106-201ENST00000612419 65 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AL449363.1-201ENST00000617815 186 ntBASIC1.26□□□□□ -2.21
SMCO4Q9NRQ5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms