Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL670379.6-201ENST00000603753 252 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC008162.1-201ENST00000604718 254 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL670379.1-201ENST00000604752 252 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL670379.5-201ENST00000605253 252 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL670379.8-201ENST00000605353 252 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL670379.7-201ENST00000605823 252 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL596275.2-204ENST00000641628 552 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AL596275.2-206ENST00000641957 626 ntBASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
ZFYVE28Q9HCC9 AC025031.4-201ENST00000621248 3271 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SNORA73.1-201ENST00000363107 205 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 OR1L6-202ENST00000373684 1044 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SNORA70.6-201ENST00000383934 134 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-601P-201ENST00000384540 107 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL360182.1-201ENST00000397433 468 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-954P-201ENST00000411355 107 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RPL7P10-201ENST00000417407 739 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL590609.2-201ENST00000421430 368 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RAC1P6-201ENST00000423911 575 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SKA2P1-201ENST00000425592 390 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC093106.2-201ENST00000428212 385 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RPL23AP89-201ENST00000439324 255 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 NUTF2P3-201ENST00000448540 384 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RPL21P93-201ENST00000480465 489 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC079140.5-201ENST00000507882 310 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 RNU6-976P-201ENST00000516086 111 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SNORA31.9-201ENST00000516429 84 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC009902.1-201ENST00000519351 183 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC103783.1-201ENST00000520506 373 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 ARF4P1-201ENST00000605447 541 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC012409.4-201ENST00000612923 249 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SNHG22-203ENST00000617833 660 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL445363.3-201ENST00000623080 671 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC138965.3-201ENST00000623875 498 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC000374.1-201ENST00000434698 1745 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC103710.2-202ENST00000641454 2853 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AC027287.1-201ENST00000553115 1453 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL359893.1-201ENST00000447628 1580 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 AL359922.3-201ENST00000624779 1670 ntBASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ZFYVE28Q9HCC9 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 SNORA71.2-201ENST00000364941 134 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 RNA5SP219-201ENST00000390940 113 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 CISD1P1-201ENST00000393907 327 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 MIR450B-201ENST00000401182 78 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AL121834.1-202ENST00000404494 277 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AL445189.1-201ENST00000405722 338 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 RNU4-65P-201ENST00000410473 140 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AL139095.3-201ENST00000419672 1203 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC008065.1-201ENST00000428525 348 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AL589765.3-201ENST00000446084 462 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 MTCO3P10-201ENST00000455912 772 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 PTP4A1P4-201ENST00000512479 322 ntBASIC5.49□□□□□ -1.53
ZFYVE28Q9HCC9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms