Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 DHX9P1-201ENST00000436565 3076 ntBASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.29□□□□□ -1.72
SEC61A2Q9H9S3 AC005332.5-201ENST00000591222 2919 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC121333.1-201ENST00000567488 2709 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNU1-94P-201ENST00000362627 173 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-61P-201ENST00000365528 109 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-26P-201ENST00000383985 107 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.482-201ENST00000384377 111 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNU6-985P-201ENST00000410182 104 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNU2-21P-201ENST00000410368 188 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 Y_RNA.646-201ENST00000410980 101 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RNA5SP107-201ENST00000411358 122 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 E2F6P2-201ENST00000420708 748 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AL360081.1-201ENST00000428299 555 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 FABP7P2-201ENST00000429946 379 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AL035666.1-201ENST00000446195 348 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RPL23AP56-201ENST00000460778 453 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RPL21P93-201ENST00000480465 489 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 RN7SL558P-201ENST00000497468 299 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC017037.1-201ENST00000508460 471 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC017037.2-201ENST00000513850 890 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 MTCO2P24-201ENST00000515611 426 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC069061.3-201ENST00000582254 823 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC011487.3-201ENST00000593607 453 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC020910.3-201ENST00000603701 874 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AL121932.1-201ENST00000605542 214 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 AC100827.5-201ENST00000615883 426 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 MIR6864-201ENST00000617935 70 ntBASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SEC61A2Q9H9S3 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SEC61A2Q9H9S3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
SEC61A2Q9H9S3 SAMMSON-226ENST00000642089 1582 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 BDP1P-201ENST00000582658 1990 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 LINC01109-201ENST00000603837 3081 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.5-201ENST00000362334 102 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RNU5E-6P-201ENST00000365574 115 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.527-201ENST00000384573 102 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AL139397.2-201ENST00000404529 772 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RN7SKP58-201ENST00000411010 305 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 VDAC1P9-201ENST00000412766 841 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 CKS1BP6-201ENST00000424932 240 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RPL7P46-201ENST00000425129 740 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RPS17P8-201ENST00000434525 335 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 MRPL48P1-201ENST00000445390 636 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 EEF1A1P1-201ENST00000447052 739 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 RN7SL809P-201ENST00000482040 297 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC020890.1-201ENST00000491837 504 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC002456.2-201ENST00000509356 380 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 TBCAP3-201ENST00000512475 312 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC016065.2-201ENST00000514530 444 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms