Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 AL136981.1-203ENST00000451452 3844 ntBASIC7.43□□□□□ -1.22
RNF39Q9H2S5 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
RNF39Q9H2S5 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 Y_RNA.95-201ENST00000363079 95 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RN7SKP62-201ENST00000384539 329 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RNU6-1104P-201ENST00000384723 104 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 SNORA26.3-201ENST00000391119 136 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AL033519.1-201ENST00000407266 307 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RNU2-59P-201ENST00000410482 191 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC244452.1-201ENST00000413798 141 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RN7SL216P-201ENST00000471607 298 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RNU6-1337P-201ENST00000516525 95 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 SCARNA15-202ENST00000516881 127 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC018442.3-201ENST00000523025 183 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 MIR3157-201ENST00000578688 85 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 uc_338.13-201ENST00000618243 179 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 FAM27E2-201ENST00000619668 403 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC068205.3-201ENST00000636385 468 ntBASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.42□□□□□ -1.22
RNF39Q9H2S5 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ARHGAP42P4-201ENST00000549782 2934 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 AC005614.1-201ENST00000598952 3653 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 Y_RNA.155-201ENST00000363632 101 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 RNU6-1305P-201ENST00000364353 104 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 RN7SKP16-201ENST00000410180 299 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 AL663061.1-201ENST00000416625 580 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 CYCSP12-201ENST00000437729 300 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 AC093270.2-201ENST00000486157 792 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 AC231760.1-201ENST00000498002 260 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 MIR4732-201ENST00000581873 76 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 MIR212-201ENST00000586026 110 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 RPL7AP69-201ENST00000595306 806 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 MIR6503-201ENST00000622884 86 ntBASIC7.41□□□□□ -1.22
RNF39Q9H2S5 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RNF39Q9H2S5 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC126755.2-208ENST00000327792 462 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 AC138969.1-213ENST00000331436 462 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RNU6-315P-201ENST00000362666 107 ntBASIC7.4□□□□□ -1.22
RNF39Q9H2S5 RNU6-499P-201ENST00000365615 107 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms