Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
VPS11Q9H270 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 RN7SKP44-201ENST00000363602 316 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RNU6-289P-201ENST00000364093 107 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 MIR93-201ENST00000385024 80 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 Z98745.1-201ENST00000402553 494 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AL592114.1-201ENST00000403842 483 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RN7SKP213-201ENST00000410746 298 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RNU4-14P-201ENST00000410858 122 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RNU4-61P-201ENST00000411243 107 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AC009161.1-201ENST00000417306 376 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS11Q9H270 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 RPS6P12-201ENST00000432491 726 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 RSU1P2-202ENST00000437884 485 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 Z95327.1-201ENST00000446082 482 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 CACYBPP2-201ENST00000453625 678 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RNU7-152P-201ENST00000458982 64 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC017015.1-201ENST00000477387 286 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC008638.1-201ENST00000506035 866 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 TXNP6-201ENST00000510190 310 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC104136.1-201ENST00000512969 394 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 SUB1P1-201ENST00000524415 382 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AC063950.1-201ENST00000552036 308 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AL163153.1-201ENST00000554223 283 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC026464.5-201ENST00000562497 722 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AC090615.1-201ENST00000577519 154 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AL353997.4-201ENST00000586196 166 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 AC087763.1-201ENST00000603391 286 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 DPPA3P3-201ENST00000603842 430 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 CTHRC1P1-201ENST00000605383 469 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
VPS11Q9H270 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 RIOK3P1-201ENST00000418778 1528 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS11Q9H270 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.55□□□□□ -1.68
VPS11Q9H270 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
VPS11Q9H270 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VPS11Q9H270 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VPS11Q9H270 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS11Q9H270 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS11Q9H270 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VPS11Q9H270 RNU1-15P-201ENST00000353977 144 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS11Q9H270 RNU1-63P-201ENST00000383902 164 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RNU6-1106P-201ENST00000390845 107 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC127526.1-201ENST00000417526 366 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC140479.3-201ENST00000418944 1126 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS11Q9H270 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS11Q9H270 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 NRBF2P3-201ENST00000432731 865 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RPS3AP52-201ENST00000435639 297 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RPL32P28-201ENST00000443577 397 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 CECR9-201ENST00000453421 199 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 HMGN2P26-201ENST00000463169 339 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 HMGB1P25-201ENST00000468402 607 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC010655.3-201ENST00000478818 450 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC233702.1-201ENST00000482905 502 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 HMGB1P30-201ENST00000492455 606 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC106872.3-201ENST00000495104 446 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 EIF4EP3-201ENST00000498782 656 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 COX7A2P2-201ENST00000505291 250 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RNU6-559P-201ENST00000516151 98 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 RNU6-1003P-201ENST00000517099 105 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC022634.1-201ENST00000520765 532 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 OR4P1P-201ENST00000530808 1136 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS11Q9H270 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS11Q9H270 OR7E18P-201ENST00000592589 702 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AL359999.1-201ENST00000604513 294 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 AC007938.3-201ENST00000604965 623 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 HMGN2P28-201ENST00000606102 262 ntBASIC4.54□□□□□ -1.68
VPS11Q9H270 uc_338.22-201ENST00000622722 187 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms