Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 AL133153.1-201ENST00000557756 303 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC007224.1-201ENST00000564410 144 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 MIR5692C1-201ENST00000585309 91 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 MIR6716-201ENST00000613413 80 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 RNU6-156P-201ENST00000621869 107 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 AL445437.1-201ENST00000623157 3087 ntBASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
UBE2OQ9C0C9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 Y_RNA.117-201ENST00000363294 101 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RPL30P2-201ENST00000414021 291 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AL451062.2-201ENST00000427515 271 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC105402.2-201ENST00000438503 358 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 OSTCP8-201ENST00000445117 448 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RNU6-1132P-201ENST00000459214 107 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RPL21P8-201ENST00000465083 535 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC104472.2-201ENST00000469035 601 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC010618.1-201ENST00000469924 477 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AP002812.1-201ENST00000495378 474 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 HMGB1P21-201ENST00000502313 581 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC104057.1-201ENST00000515547 497 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RNU6-347P-201ENST00000516658 105 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RNU6-798P-201ENST00000516912 103 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 SCARNA20.4-201ENST00000516969 131 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 RNU1-54P-201ENST00000517181 120 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AP001880.2-201ENST00000538233 448 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC023575.1-201ENST00000580510 358 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 MIR7853-201ENST00000584820 132 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 VN1R85P-201ENST00000601587 426 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC012443.1-201ENST00000605605 231 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC023813.4-201ENST00000607580 580 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 AC074029.4-201ENST00000624796 1859 ntBASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
UBE2OQ9C0C9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
UBE2OQ9C0C9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 ZNF734P-201ENST00000419494 1534 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 Y_RNA.210-201ENST00000364161 110 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 PPIAP9-201ENST00000403866 498 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AL583834.1-201ENST00000406943 343 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 RNU2-23P-201ENST00000410545 195 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 GPS2P1-201ENST00000411761 986 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AL139095.3-201ENST00000419672 1203 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 PGBD4P6-201ENST00000421501 610 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 USMG5P1-201ENST00000425964 177 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 NDUFB4P8-201ENST00000435351 367 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 RNU6-1069P-201ENST00000516612 133 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 RNA5SP384-201ENST00000516615 116 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 RNU6-64P-201ENST00000517119 105 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 AC022616.4-201ENST00000522985 181 ntBASIC5.58□□□□□ -1.52
UBE2OQ9C0C9 HMGB3P26-201ENST00000560051 582 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms