Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 AC009039.2-201ENST00000624524 529 ntBASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CHMP4AQ9BY43 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 RNU4-35P-201ENST00000362588 141 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 MIR767-201ENST00000390228 109 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 TXNP7-201ENST00000406296 293 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 RN7SKP220-201ENST00000410611 288 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AL513331.1-201ENST00000411908 397 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 RPL7P10-201ENST00000417407 739 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC104332.2-201ENST00000429959 156 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 LSM1P1-201ENST00000438629 273 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC092185.1-201ENST00000491371 97 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 SCARNA1-201ENST00000517138 166 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC034268.2-201ENST00000571784 482 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC005498.1-201ENST00000592125 465 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC091057.3-201ENST00000602684 733 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AC069200.1-201ENST00000609511 323 ntBASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CHMP4AQ9BY43 AP000776.1-201ENST00000530032 1663 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 SNORD116.1-201ENST00000365628 92 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 RNU2-33P-201ENST00000410344 192 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 DBIP2-201ENST00000419076 262 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 NANOGP5-201ENST00000424456 877 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AL365496.1-201ENST00000426885 215 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 BNIP3P2-201ENST00000441221 577 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AP1S2P1-201ENST00000457344 379 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 RN7SL807P-201ENST00000470923 297 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 RPS3AP50-201ENST00000487064 803 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 SEM1P1-201ENST00000506694 209 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 RAC1P5-201ENST00000512182 576 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 IGKV2-26-201ENST00000518305 343 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 BNIP3P22-201ENST00000593399 556 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AL133445.2-201ENST00000611191 527 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC006386.1-201ENST00000619436 415 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC022149.2-201ENST00000621061 203 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 AC079228.1-201ENST00000624774 1049 ntBASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHMP4AQ9BY43 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CHMP4AQ9BY43 AC006504.1-201ENST00000562493 3666 ntBASIC4.4□□□□□ -1.7
CHMP4AQ9BY43 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHMP4AQ9BY43 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 RPL5P18-201ENST00000406671 891 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 CCNG1P1-201ENST00000406783 885 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 MTCO1P17-201ENST00000411522 491 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL158156.1-201ENST00000422509 473 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 ZNF863P-201ENST00000426746 417 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 SDR42E1P3-201ENST00000438345 502 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL714022.1-201ENST00000439897 151 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 HMGB3P11-201ENST00000440127 604 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL049734.2-201ENST00000441066 616 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 RPL21P10-201ENST00000463521 490 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC116337.2-201ENST00000477662 156 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL135752.1-201ENST00000479477 471 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL358832.1-201ENST00000497800 389 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 UBE2V1P12-201ENST00000503954 474 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 TTC39CP1-201ENST00000512513 755 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 MTCO1P47-201ENST00000523889 1271 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC068587.4-201ENST00000533893 186 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC010620.2-201ENST00000600135 313 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 RNU4-5P-201ENST00000607255 135 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms