Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AL513043.1-201ENST00000439124 535 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC092393.1-201ENST00000439625 742 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AL158053.1-201ENST00000441503 453 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC025750.2-201ENST00000442609 450 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MOB1AP2-201ENST00000446060 614 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 VN1R10P-201ENST00000447106 875 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 SEPT14P24-201ENST00000447236 180 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AP001486.1-201ENST00000463339 476 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 KC877373.1-201ENST00000479066 408 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 DYNLL1P6-201ENST00000503440 264 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC026801.2-201ENST00000515352 425 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 RNA5SP356-201ENST00000515972 94 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 RPPH1-2P-201ENST00000516688 293 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 CASP1P1-201ENST00000526345 212 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 GTF3AP2-201ENST00000557014 266 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 MIR4666A-201ENST00000580160 79 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC010620.2-201ENST00000600135 313 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AL356575.1-201ENST00000603008 283 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC090115.4-201ENST00000609970 188 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 TUG1_1.1-201ENST00000610654 145 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC011330.2-201ENST00000621680 635 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 AC110079.1-202ENST00000635213 138 ntBASIC1.94□□□□□ -2.1
UPK3BQ9BT76 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
UPK3BQ9BT76 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 ZNF271P-202ENST00000465539 1970 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 HMGB1P5-201ENST00000255320 642 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL672167.1-206ENST00000356293 943 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RNU1-35P-201ENST00000362782 153 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 SNORA5B-201ENST00000363786 132 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RNU6-657P-201ENST00000383904 107 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RNU6-198P-201ENST00000384258 104 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 MIR135A2-201ENST00000384854 100 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL356057.2-201ENST00000403318 432 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 PTGES3P2-201ENST00000407942 482 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RNU2-43P-201ENST00000410306 190 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RNA5SP21-201ENST00000410917 96 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC019097.1-201ENST00000424783 735 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RPL7L1P10-201ENST00000427790 463 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 CR769767.1-201ENST00000436337 346 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC112653.1-201ENST00000443851 386 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC234775.1-201ENST00000454247 670 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC092757.1-201ENST00000467293 467 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC069306.1-201ENST00000507006 843 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 RPL37P25-201ENST00000507308 276 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 TBCAP3-201ENST00000512475 312 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC119751.5-201ENST00000514077 770 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC027338.1-201ENST00000514840 825 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 OR8K2P-201ENST00000524645 927 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 HPRT1P3-201ENST00000539521 576 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC128657.1-201ENST00000549459 145 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 HMGB1P14-201ENST00000557424 591 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 ZNF971P-201ENST00000562068 1249 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 ACTR3BP3-201ENST00000565577 979 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 LARP7P2-201ENST00000575306 125 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 BNIP3P24-201ENST00000593398 557 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC098483.2-201ENST00000603158 454 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL035411.2-201ENST00000604022 421 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL033523.1-201ENST00000605153 153 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 ATP1B3P1-201ENST00000605365 821 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC091946.2-201ENST00000606105 291 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AP000238.1-201ENST00000608759 426 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AP005137.2-201ENST00000609238 400 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC104237.2-201ENST00000612456 443 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC068880.5-201ENST00000624331 290 ntBASIC1.93□□□□□ -2.1
UPK3BQ9BT76 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.93□□□□□ -2.1
UPK3BQ9BT76 AC091948.2-201ENST00000636510 279 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms