Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SNORA7.2-201ENST00000364446 145 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 U3.11-201ENST00000364476 212 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 SNORA70.2-201ENST00000364506 135 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 SNORA23-201ENST00000365128 182 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 TXNP7-201ENST00000406296 293 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RNA5SP317-201ENST00000410176 116 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RNA5SP311-201ENST00000411290 116 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RAB28P1-201ENST00000411517 641 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RHEBP3-201ENST00000411920 351 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 MTND3P17-201ENST00000416968 344 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 MTCO1P39-201ENST00000426148 480 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 ISCA1P1-201ENST00000426679 387 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AL358472.1-201ENST00000431295 329 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 OR4C10P-201ENST00000434991 931 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC090774.1-201ENST00000435925 246 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AF228730.2-201ENST00000438784 848 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AL162389.1-201ENST00000449233 177 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 NUTF2P7-201ENST00000453086 375 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 NANOGP10-201ENST00000453325 895 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.74□□□□□ -1.81
NPAS1Q99742 RPL23AP31-201ENST00000456160 467 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC008481.1-201ENST00000463278 396 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RPS3AP14-201ENST00000483907 780 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC078817.1-201ENST00000492623 435 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 NIPA2P2-201ENST00000496376 1083 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 HMGB1P29-201ENST00000505659 499 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AL117351.2-201ENST00000513571 157 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RNA5SP315-201ENST00000516340 116 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 RNA5SP312-201ENST00000517068 116 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 MTND1P5-201ENST00000517906 940 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS1Q99742 SNRPGP16-201ENST00000533275 226 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AC012507.3-201ENST00000603556 477 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 MIR432-201ENST00000606207 94 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.74□□□□□ -1.81
NPAS1Q99742 AL160394.1-201ENST00000624765 724 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
NPAS1Q99742 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
NPAS1Q99742 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 AC138915.3-201ENST00000562908 1389 ntBASIC3.74□□□□□ -1.81
NPAS1Q99742 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NPAS1Q99742 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
NPAS1Q99742 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS1Q99742 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.73□□□□□ -1.81
NPAS1Q99742 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.73□□□□□ -1.81
NPAS1Q99742 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS1Q99742 OR5J1P-201ENST00000313544 939 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS1Q99742 MIR372-201ENST00000362225 67 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.73□□□□□ -1.81
NPAS1Q99742 TBCAP1-201ENST00000436520 327 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 DNAJC19P4-201ENST00000440115 345 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC006480.1-201ENST00000449887 378 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 MTND2P24-201ENST00000453434 806 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC078918.1-201ENST00000498515 228 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC025554.1-201ENST00000505641 188 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 RNU2-58P-201ENST00000516403 183 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 RNU7-51P-201ENST00000516560 62 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC124947.2-202ENST00000552735 133 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 ZNF519P2-201ENST00000557032 169 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 RPL23AP87-202ENST00000573039 466 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 MTATP6P3-201ENST00000581686 676 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC098848.2-201ENST00000588023 330 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.73□□□□□ -1.81
NPAS1Q99742 AC244505.7-201ENST00000599675 272 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 AC126118.1-201ENST00000607744 628 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 MIR4275-201ENST00000636486 87 ntBASIC3.73□□□□□ -1.81
NPAS1Q99742 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
NPAS1Q99742 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
NPAS1Q99742 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NPAS1Q99742 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms