Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.76□□□□□ -1.97
IFT140Q96RY7 ELOCP34-201ENST00000604436 327 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 AC105429.2-201ENST00000610567 517 ntBASIC2.76□□□□□ -1.97
IFT140Q96RY7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
IFT140Q96RY7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
IFT140Q96RY7 RNU1-42P-201ENST00000364033 160 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 RNY1-201ENST00000364228 113 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC092638.1-201ENST00000411966 1275 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC022022.1-201ENST00000430304 178 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 MTND2P2-201ENST00000434633 945 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 HMGN2P20-201ENST00000437531 273 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AMD1P1-201ENST00000457220 922 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC069528.1-202ENST00000482888 637 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.75□□□□□ -1.97
IFT140Q96RY7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.75□□□□□ -1.97
IFT140Q96RY7 SNORD53B-201ENST00000577887 78 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC013444.2-201ENST00000603317 787 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AL049779.4-201ENST00000604500 156 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC018754.1-201ENST00000607486 925 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC090425.2-201ENST00000608818 501 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC092954.1-201ENST00000609121 445 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 OR10AB1P-201ENST00000609613 938 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AC011890.2-201ENST00000613393 294 ntBASIC2.75□□□□□ -1.97
IFT140Q96RY7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.75□□□□□ -1.97
IFT140Q96RY7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.75□□□□□ -1.97
IFT140Q96RY7 SNORD114-22-201ENST00000365423 72 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 AL121972.1-201ENST00000402023 252 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 SSR1P1-201ENST00000407630 814 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 RPS15AP17-201ENST00000470598 390 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 AC108734.3-201ENST00000481241 1165 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.74□□□□□ -1.97
IFT140Q96RY7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.74□□□□□ -1.97
IFT140Q96RY7 AC090953.1-201ENST00000604305 1092 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
IFT140Q96RY7 MIR3199-2-201ENST00000636243 86 ntBASIC2.74□□□□□ -1.97
IFT140Q96RY7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
IFT140Q96RY7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
IFT140Q96RY7 RNU6-1-201ENST00000383898 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-42P-201ENST00000384165 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-36P-201ENST00000384172 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-4P-201ENST00000384205 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-5P-201ENST00000384238 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-3P-201ENST00000384314 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-2-201ENST00000384627 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-9-201ENST00000384776 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-33P-201ENST00000384793 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 SSXP9-201ENST00000417503 292 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 HMGB1P12-201ENST00000438594 598 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 VN1R96P-201ENST00000446052 858 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 RNU6-6P-201ENST00000606623 107 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC004241.3-201ENST00000611728 517 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 PVT1_3.1-201ENST00000620853 95 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 AC012321.1-201ENST00000561622 1588 ntBASIC2.73□□□□□ -1.97
IFT140Q96RY7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
IFT140Q96RY7 SNORD108-201ENST00000459332 71 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.72□□□□□ -1.97
IFT140Q96RY7 HMGN1P7-201ENST00000491722 313 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 RPS15AP36-201ENST00000492022 382 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 AC124283.4-201ENST00000581815 456 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 SEPT7P9-203ENST00000604116 343 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.72□□□□□ -1.97
IFT140Q96RY7 BX649567.1-201ENST00000642071 1134 ntBASIC2.72□□□□□ -1.97
IFT140Q96RY7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IFT140Q96RY7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
IFT140Q96RY7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IFT140Q96RY7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
IFT140Q96RY7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
IFT140Q96RY7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 AC078918.1-201ENST00000498515 228 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 AIG1P1-201ENST00000503376 148 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 HMGN1P28-201ENST00000521340 364 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 PSMA3P-201ENST00000555485 635 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 AL121839.1-201ENST00000556233 1185 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 MIR4474-201ENST00000579189 78 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 RPL23AP78-201ENST00000599928 470 ntBASIC2.71□□□□□ -1.97
IFT140Q96RY7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.71□□□□□ -1.97
IFT140Q96RY7 MTCO1P6-201ENST00000481192 1384 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 OR4G1P-203ENST00000641984 1631 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 MCTS2P-201ENST00000394552 546 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 XKRYP4-201ENST00000414395 483 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 PIGFP3-201ENST00000441918 722 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 XKRYP5-201ENST00000449659 483 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.71□□□□□ -1.98
IFT140Q96RY7 RN7SKP234-201ENST00000517173 224 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 MTND2P17-201ENST00000550281 688 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 AC104581.2-201ENST00000572227 430 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.71□□□□□ -1.98
IFT140Q96RY7 VN1R84P-201ENST00000593697 235 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 AC007620.3-201ENST00000608131 497 ntBASIC2.71□□□□□ -1.98
IFT140Q96RY7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
IFT140Q96RY7 AC005336.3-201ENST00000623833 2679 ntBASIC2.7□□□□□ -1.98
IFT140Q96RY7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms