Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SAP18P1-201ENST00000512058 390 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AP001804.3-201ENST00000525146 880 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 LSM6P2-201ENST00000552208 177 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 CYCSP2-201ENST00000558168 301 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC022662.1-201ENST00000580252 331 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 VN1R90P-201ENST00000595717 726 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC006329.2-201ENST00000611491 394 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC140725.3-201ENST00000616193 880 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC244100.1-202ENST00000621554 382 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 AC099506.2-201ENST00000623074 221 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC00477Q96M19 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 DBF4P1-201ENST00000412976 1892 ntBASIC2.3□□□□□ -2.04
LINC00477Q96M19 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC00477Q96M19 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 NUP58P1-201ENST00000502546 1738 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC00477Q96M19 MTCO1P12-201ENST00000414273 1543 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 CDR1-202ENST00000625883 1485 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL022578.1-201ENST00000439330 1433 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC00477Q96M19 OR5BR1P-201ENST00000524992 1330 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LINC00477Q96M19 OR5H2-201ENST00000355273 945 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RNU4-28P-201ENST00000364739 141 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 SNORA7.4-201ENST00000384249 137 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 ATP5F1P3-201ENST00000397213 657 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RPS24P7-201ENST00000416921 246 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC005005.2-201ENST00000420779 380 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 RPL7P30-201ENST00000420888 709 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL645937.1-202ENST00000421799 937 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC007742.1-201ENST00000425789 329 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 ELOCP26-201ENST00000436067 329 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 MTND1P26-201ENST00000440488 538 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 MTND2P20-201ENST00000440805 661 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RPL21P133-201ENST00000443666 476 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL591719.1-201ENST00000444669 744 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RNU7-136P-201ENST00000458819 69 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 RN7SL293P-201ENST00000481765 281 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RN7SL20P-201ENST00000488827 297 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC096751.1-202ENST00000502691 1067 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC147055.4-201ENST00000504399 745 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC098799.2-201ENST00000509466 868 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 RNU6-583P-201ENST00000516012 92 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC024224.1-201ENST00000538284 609 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC128657.1-201ENST00000549459 145 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 RPL21P12-201ENST00000559810 515 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC090695.1-201ENST00000561269 1222 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC063944.3-201ENST00000609969 533 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AL359198.2-201ENST00000611836 194 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 Z99129.2-201ENST00000619967 314 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.29□□□□□ -2.04
LINC00477Q96M19 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.29□□□□□ -2.04
LINC00477Q96M19 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LINC00477Q96M19 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.28□□□□□ -2.04
LINC00477Q96M19 RNU6-433P-201ENST00000363216 104 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 Y_RNA.311-201ENST00000365068 96 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 MIR506-201ENST00000384998 124 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 RNU6-821P-201ENST00000390995 107 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 U3.42-201ENST00000408746 214 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL133384.1-201ENST00000412744 351 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 BX682237.1-201ENST00000415016 335 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 AL139421.1-201ENST00000423010 169 ntBASIC2.28□□□□□ -2.04
LINC00477Q96M19 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms