Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC97Q96F63 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC97Q96F63 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC97Q96F63 AC068870.1-201ENST00000563737 2455 ntBASIC5.68□□□□□ -1.5
CCDC97Q96F63 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC97Q96F63 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 RNA5SP443-201ENST00000363083 132 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 RNA5SP326-201ENST00000363209 110 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 Y_RNA.202-201ENST00000364083 110 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 Y_RNA.216-201ENST00000364205 93 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 SNORA58B-201ENST00000364259 136 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 U3.10-201ENST00000364459 214 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 Y_RNA.245-201ENST00000364493 95 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 SNORA70-201ENST00000384436 135 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 SNORA75.4-201ENST00000391278 119 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AL133270.1-201ENST00000402635 279 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 CRIP1P1-201ENST00000427567 185 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 GPM6BP2-201ENST00000432046 144 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 GPM6BP1-201ENST00000446387 144 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 CYCSP34-201ENST00000458172 304 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 Y_RNA.711-201ENST00000516993 102 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 RNU6-1213P-201ENST00000517075 94 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 RNA5SP290-201ENST00000517133 127 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AP003122.3-201ENST00000526316 255 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC084851.1-201ENST00000529105 249 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 AL049872.1-201ENST00000556323 322 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 AL133481.2-203ENST00000607558 139 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC126915.2-201ENST00000610957 190 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC005344.1-201ENST00000613391 459 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 SNORD39.4-201ENST00000620099 78 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 AC018445.2-201ENST00000622987 260 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 MTND5P19-201ENST00000424872 1794 ntBASIC5.67□□□□□ -1.5
CCDC97Q96F63 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC97Q96F63 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CCDC97Q96F63 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 SRRM1P3-201ENST00000426911 2678 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU6-600P-201ENST00000362524 99 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU6-741P-201ENST00000383889 107 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU6-310P-201ENST00000384655 107 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU2-33P-201ENST00000410344 192 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 RPL31P12-201ENST00000422587 358 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 HMGB1P9-201ENST00000429856 646 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 GAPDHP58-201ENST00000438477 1006 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 KRT8P51-201ENST00000438938 274 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 FABP5P15-201ENST00000453566 214 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RPS4XP1-201ENST00000482189 787 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU6-1045P-201ENST00000516321 107 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 IGLV3-24-201ENST00000517477 197 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 AC021678.3-201ENST00000517893 476 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 MIR4700-201ENST00000578311 74 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 AC006504.6-201ENST00000590142 199 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 RNU6-85P-201ENST00000605989 107 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 AC040896.1-201ENST00000613819 479 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 RN7SL544P-201ENST00000617232 284 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 RN7SL763P-201ENST00000620922 284 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC97Q96F63 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC97Q96F63 AC005183.1-201ENST00000603687 1979 ntBASIC5.66□□□□□ -1.5
CCDC97Q96F63 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.65□□□□□ -1.5
CCDC97Q96F63 AC063976.2-201ENST00000425667 3556 ntBASIC5.65□□□□□ -1.5
CCDC97Q96F63 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms