Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC104850.1-201ENST00000435940 476 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 HLA-N-201ENST00000437516 135 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 DNAJC19P4-201ENST00000440115 345 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL121871.1-201ENST00000443413 436 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC108059.3-201ENST00000456388 214 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RPS26P3-201ENST00000470205 348 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC090543.2-201ENST00000483963 348 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC004057.1-201ENST00000485827 348 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL358832.1-201ENST00000497800 389 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC104619.4-201ENST00000510773 249 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC091133.4-201ENST00000511142 308 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC026801.2-201ENST00000515352 425 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC109635.4-202ENST00000531666 412 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC099489.2-201ENST00000574976 260 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL022099.1-201ENST00000604551 712 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AL049634.3-201ENST00000604968 457 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC004492.1-201ENST00000607036 742 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC013476.2-201ENST00000614456 459 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC243312.2-201ENST00000623340 601 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC105074.1-201ENST00000623380 3095 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AC019226.1-201ENST00000625666 515 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 ZNF962P-201ENST00000443465 3140 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 MTND5P26-201ENST00000426018 1752 ntBASIC3.91□□□□□ -1.78
HMGB4Q8WW32 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGB4Q8WW32 AP001350.1-201ENST00000601906 1524 ntBASIC3.9□□□□□ -1.78
HMGB4Q8WW32 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGB4Q8WW32 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 RNU5E-8P-201ENST00000363502 116 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 RNU6-432P-201ENST00000384196 109 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 RNU4-65P-201ENST00000410473 140 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 Y_RNA.599-201ENST00000410489 109 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 SYF2P2-201ENST00000417620 583 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 MTCO1P39-201ENST00000426148 480 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC090774.1-201ENST00000435925 246 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 NANOGNBP1-201ENST00000448444 480 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL133162.1-201ENST00000463228 453 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 TMED11P-201ENST00000479478 690 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 RN7SL271P-201ENST00000487601 295 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 KCTD9P5-201ENST00000504141 1170 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC021146.1-201ENST00000511202 716 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC087369.1-201ENST00000520775 996 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 DEFB108A-201ENST00000530110 222 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC125611.2-201ENST00000551907 647 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL139395.1-201ENST00000603662 160 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC104662.1-201ENST00000604448 511 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL034351.1-201ENST00000605288 668 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AL021997.1-201ENST00000605757 193 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 AC091953.5-201ENST00000622919 233 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 TAB3P1-202ENST00000452645 1634 ntBASIC3.9□□□□□ -1.79
HMGB4Q8WW32 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGB4Q8WW32 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGB4Q8WW32 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms