Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCHCR1Q8TD31 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 MIR331-201ENST00000362302 94 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RNU6-1078P-201ENST00000364522 103 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 SNORA56-201ENST00000383966 129 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RNU6-74P-201ENST00000384235 107 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC068050.1-201ENST00000394891 380 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 FAR2P2-201ENST00000413041 594 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 FAR2P4-202ENST00000425399 584 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RPS29P17-201ENST00000430795 166 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RPL23AP30-201ENST00000432419 501 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 MRPS18BP2-201ENST00000434310 759 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AL356535.1-201ENST00000440335 398 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RNU7-59P-201ENST00000459101 61 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RNU6-835P-201ENST00000516974 104 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 RNU6-410P-201ENST00000517006 107 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AP001646.1-201ENST00000527936 915 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AP000857.1-201ENST00000532151 543 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 TOMM20P2-201ENST00000540082 421 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 CR383656.7-201ENST00000548164 174 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 HMGB1P6-201ENST00000569046 646 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 LARP7P1-201ENST00000605576 316 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC064801.1-201ENST00000612025 407 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 MIR486-1-201ENST00000612171 68 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 C2orf27A-204ENST00000623058 969 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AC140479.6-201ENST00000633535 357 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 ZNF962P-201ENST00000443465 3140 ntBASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCHCR1Q8TD31 ZNF680P1-201ENST00000436625 1469 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 MIR423-201ENST00000362201 94 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 RNU6-1158P-201ENST00000391167 107 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 RNU6-876P-201ENST00000391295 104 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC016397.1-201ENST00000412463 242 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC011933.1-201ENST00000413334 321 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC092447.6-201ENST00000414578 210 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 MRPL50P2-201ENST00000416821 482 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 OR1AA1P-201ENST00000419597 916 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 ZNF863P-201ENST00000426746 417 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 GTF2IP20-201ENST00000431663 360 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 RNU6-261P-201ENST00000459506 102 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC116533.1-201ENST00000459748 321 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC011276.1-201ENST00000469688 323 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC098799.2-201ENST00000509466 868 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 SNORA40.12-201ENST00000516329 111 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AF235103.2-201ENST00000525753 346 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 ADI1P3-201ENST00000549509 470 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AL133153.1-201ENST00000557756 303 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 MIR4644-201ENST00000579929 84 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AC098848.2-201ENST00000588023 330 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 GLUD1P4-201ENST00000590914 418 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 AP001429.1-201ENST00000602568 530 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 NRBF2P5-201ENST00000603087 788 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 MIR3662-201ENST00000637030 95 ntBASIC4.37□□□□□ -1.71
CCHCR1Q8TD31 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms