Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AL356421.1-201ENST00000403255 413 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AL591034.1-201ENST00000407447 340 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 MTND1P26-201ENST00000440488 538 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 RABEPKP1-201ENST00000440529 1026 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 RNU7-125P-201ENST00000458760 62 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC011260.1-201ENST00000578420 472 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 MIR544B-201ENST00000582372 78 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC090616.2-202ENST00000584248 222 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 UBE2L4-201ENST00000587688 464 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC013444.2-201ENST00000603317 787 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 MIR378J-201ENST00000611988 109 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AL158801.5-201ENST00000623123 465 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC079248.2-201ENST00000623779 326 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC092192.1-201ENST00000633154 1018 ntBASIC3.28□□□□□ -1.88
CCDC63Q8NA47 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC63Q8NA47 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RNU6-97P-201ENST00000363387 104 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RPL21P17-201ENST00000397467 475 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AF228730.1-201ENST00000397972 663 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL136372.1-201ENST00000403060 228 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RNU4-72P-201ENST00000410754 173 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 MTCO1P17-201ENST00000411522 491 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RPL23AP39-201ENST00000415533 405 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 HSFY4P-201ENST00000415994 1181 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 YPEL5P1-201ENST00000419731 367 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RPS6P15-201ENST00000431996 751 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RAC1P7-201ENST00000445367 377 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 CDC27P1-201ENST00000445384 715 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC072039.1-201ENST00000477611 581 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC021382.1-201ENST00000483523 359 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AP001025.2-201ENST00000490908 477 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RPL7P23-201ENST00000493874 747 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC010486.2-201ENST00000505572 483 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC022447.3-201ENST00000506865 495 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 SNORA31.8-201ENST00000516327 108 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 RNU6-678P-201ENST00000516832 109 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC103843.2-201ENST00000530523 682 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AL391156.1-201ENST00000554965 554 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC135628.1-201ENST00000568867 534 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 BDH2P1-201ENST00000602288 736 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AP001330.4-201ENST00000604350 154 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 TUG1_1.1-201ENST00000610654 145 ntBASIC3.27□□□□□ -1.89
CCDC63Q8NA47 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.27□□□□□ -1.89
CCDC63Q8NA47 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 RN7SKP280-201ENST00000364196 304 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 SNORA70.2-201ENST00000364506 135 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 RNU6-769P-201ENST00000384407 104 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 AL049545.1-201ENST00000401856 572 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 MIR1305-201ENST00000408300 86 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 RNU2-43P-201ENST00000410306 190 ntBASIC3.26□□□□□ -1.89
CCDC63Q8NA47 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC63Q8NA47 USP9YP26-201ENST00000421008 661 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms