Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SCUBE3Q8IX30 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 IQCB2P-201ENST00000401788 1633 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 AL355433.1-201ENST00000422804 300 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RPL30P3-201ENST00000424262 333 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 AL662874.1-201ENST00000426065 230 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 KRT8P51-201ENST00000438938 274 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RPL26P6-201ENST00000440913 438 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 AL354710.1-201ENST00000453641 246 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RNU7-87P-201ENST00000459343 62 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 AP001324.2-201ENST00000461163 319 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 SNORA31.3-201ENST00000516029 96 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RNA5SP362-201ENST00000516048 118 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 Y_RNA.679-201ENST00000516416 91 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RNU6-914P-201ENST00000516749 109 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 RN7SKP258-201ENST00000517151 304 ntBASIC6□□□□□ -1.45
SCUBE3Q8IX30 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SCUBE3Q8IX30 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SCUBE3Q8IX30 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 OR13C1P-202ENST00000641378 2919 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 SRRM1P3-201ENST00000426911 2678 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC027228.2-201ENST00000567141 2154 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 SNORD63-201ENST00000384262 68 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 Y_RNA.504-201ENST00000384481 104 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 RPL11P3-201ENST00000395256 523 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 Y_RNA.590-201ENST00000410140 107 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AP000281.1-201ENST00000444036 316 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 U8.21-201ENST00000459536 136 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 SNORA43.3-201ENST00000517240 103 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC025755.1-201ENST00000521306 278 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 CASP1P1-201ENST00000526345 212 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 MIR4420-201ENST00000583944 77 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC060780.2-201ENST00000589047 198 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AL355812.1-201ENST00000603215 216 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC009318.2-201ENST00000610917 651 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC118658.2-201ENST00000618697 459 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 RBBP8P1-201ENST00000449447 1844 ntBASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SCUBE3Q8IX30 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 AC104964.3-201ENST00000606115 2860 ntBASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SCUBE3Q8IX30 RNU1-19P-201ENST00000363306 165 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms