Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.36□□□□□ -1.55
NPAS4Q8IUM7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.31-201ENST00000362574 102 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 Y_RNA.378-201ENST00000365652 113 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 OR1L6-202ENST00000373684 1044 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 SNORA36C-201ENST00000384289 132 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RNU6-331P-201ENST00000384724 107 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 MIR1290-201ENST00000408735 78 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 NUP35P1-201ENST00000422734 947 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RPL18P10-201ENST00000425606 538 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AL591212.2-201ENST00000433923 257 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AC005154.2-201ENST00000438110 379 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 MTND5P22-201ENST00000458380 195 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RPL23AP56-201ENST00000460778 453 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RPL5P30-201ENST00000465511 891 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 MIR4503-201ENST00000582187 83 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AL355598.1-201ENST00000604169 202 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 AC019206.1-201ENST00000621938 425 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 NOL8P1-201ENST00000508336 3529 ntBASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.35□□□□□ -1.55
NPAS4Q8IUM7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RNU6-434P-201ENST00000384376 107 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 CISD1P1-201ENST00000393907 327 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AL121834.1-202ENST00000404494 277 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RN7SKP58-201ENST00000411010 305 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RNU6-1304P-201ENST00000411374 106 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AL513331.1-201ENST00000411908 397 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC114755.2-201ENST00000413520 361 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 PRPS1P1-201ENST00000445305 876 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RPL23AP31-201ENST00000456160 467 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC092451.1-201ENST00000480211 153 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC083904.1-201ENST00000487828 231 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 RPL39P5-202ENST00000512505 151 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 COX6CP5-201ENST00000527162 228 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AL118558.2-201ENST00000556294 238 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 NDUFB4P11-201ENST00000560510 395 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 MIR3921-201ENST00000577308 85 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 MIR5583-1-201ENST00000580941 59 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AP001330.4-201ENST00000604350 154 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 AC083809.1-201ENST00000615051 472 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 MIR6853-201ENST00000619642 74 ntBASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NPAS4Q8IUM7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.34□□□□□ -1.56
NPAS4Q8IUM7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
NPAS4Q8IUM7 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.34□□□□□ -1.56
NPAS4Q8IUM7 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU6-1318P-201ENST00000365389 103 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU6-629P-201ENST00000384061 103 ntBASIC5.33□□□□□ -1.56
NPAS4Q8IUM7 RNU6-1297P-201ENST00000384415 104 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms