Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 ARL2BPP5-201ENST00000523141 481 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 HPRT1P3-201ENST00000539521 576 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AADACP1-206ENST00000561502 1193 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AL158211.1-201ENST00000566763 763 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 MTATP6P24-201ENST00000576835 677 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AP001269.3-201ENST00000588718 329 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC021749.1-201ENST00000604322 607 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC013244.3-201ENST00000605614 388 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC063944.3-201ENST00000609969 533 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 AC073968.1-201ENST00000618594 637 ntBASIC3.7□□□□□ -1.82
NPHP3Q7Z494 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 MTND5P27-201ENST00000428871 1720 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC092593.1-201ENST00000515413 1815 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 RNA5SP289-201ENST00000362332 137 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 RNU6-492P-201ENST00000363035 104 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 SNORA46-201ENST00000384762 135 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 RPL23AP47-201ENST00000408017 460 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC092634.6-201ENST00000418558 192 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 SNRPGP3-201ENST00000469405 227 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC090525.1-201ENST00000479116 478 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC091951.3-201ENST00000504093 246 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 NDUFB4P9-201ENST00000511646 388 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC091057.2-201ENST00000602594 792 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AL355812.1-201ENST00000603215 216 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC069545.1-201ENST00000605671 358 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.69□□□□□ -1.82
NPHP3Q7Z494 AC090897.3-201ENST00000636973 1157 ntBASIC3.69□□□□□ -1.82
NPHP3Q7Z494 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 DBF4P1-201ENST00000412976 1892 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC109315.1-201ENST00000584143 1347 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 RNU4-92P-201ENST00000363783 136 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 RNU6-1181P-201ENST00000384191 106 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AL133384.1-201ENST00000412744 351 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 LUZP4P1-201ENST00000415420 344 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 Z98742.3-201ENST00000418637 326 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 MRPS36P1-201ENST00000421291 307 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 MTCO3P1-205ENST00000422088 832 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 VDAC1P3-201ENST00000434069 851 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 USP9YP22-201ENST00000438971 294 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC007327.1-201ENST00000447461 264 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AL034418.1-201ENST00000448675 860 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 UQCRHP3-201ENST00000451503 251 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 CEACAMP4-201ENST00000457676 421 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 RN7SL75P-201ENST00000461926 281 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC108734.3-201ENST00000481241 1165 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC109635.4-202ENST00000531666 412 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AL845331.3-202ENST00000562856 261 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC138915.2-201ENST00000569776 97 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC092954.1-201ENST00000609121 445 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC092106.3-201ENST00000611308 722 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC107075.1-201ENST00000613695 314 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC023158.2-201ENST00000614876 543 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 AC009318.4-201ENST00000620496 486 ntBASIC3.68□□□□□ -1.82
NPHP3Q7Z494 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP3Q7Z494 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms