Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 RNU6-414P-201ENST00000363705 104 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 Y_RNA.426-201ENST00000384068 113 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AL590635.1-201ENST00000406314 586 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AC079780.1-201ENST00000428259 207 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 MLLT10P2-201ENST00000506434 249 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AC087752.2-201ENST00000521219 281 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 AC132068.1-201ENST00000623805 459 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 MIR665-201ENST00000635949 72 ntBASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC11.58□□□□□ -0.56
CHIC1Q5VXU3 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 RNY3P2-201ENST00000362918 102 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 Y_RNA.91-201ENST00000363042 107 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 Y_RNA.198-201ENST00000364013 98 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 RNU6-652P-201ENST00000365488 107 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 RNU6-1323P-201ENST00000384025 107 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 RN7SL868P-201ENST00000485915 303 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 DEFB131E-201ENST00000532329 154 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 AC105245.1-201ENST00000581934 244 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CHIC1Q5VXU3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 RNA5SP152-201ENST00000365184 110 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AL451046.2-201ENST00000403074 277 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 MIR1290-201ENST00000408735 78 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AL590128.1-201ENST00000433407 286 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 TREML3P-201ENST00000457327 501 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 RNA5SP57-201ENST00000459463 123 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 RNU6-162P-201ENST00000516228 103 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 RNU1-117P-201ENST00000517041 158 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 SNORA31.23-201ENST00000517219 133 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AC027176.1-201ENST00000560204 514 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 RN7SL32P-201ENST00000580514 281 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 5S_rRNA.13-201ENST00000622298 123 ntBASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
CHIC1Q5VXU3 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 RNU6-674P-201ENST00000363831 107 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 RNU4-36P-201ENST00000364294 144 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 Y_RNA.366-201ENST00000365540 102 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 AC092017.2-201ENST00000427600 362 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 AC012308.1-201ENST00000451232 178 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 RN7SL705P-201ENST00000481678 294 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 RNU6-267P-201ENST00000516714 103 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 U7.3-201ENST00000616123 62 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 AL354718.1-201ENST00000619764 589 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 Six3os1_1.1-201ENST00000620900 87 ntBASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CHIC1Q5VXU3 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC11.54□□□□□ -0.56
CHIC1Q5VXU3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms