Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 ELF2P3-201ENST00000445099 1506 ntBASIC5□□□□□ -1.61
CCDC144BQ3MJ40 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 CALM2P3-201ENST00000400429 449 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 MIR548F1-201ENST00000408667 84 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 RPL27AP8-201ENST00000424277 446 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 HSFY6P-201ENST00000445573 403 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 SNRPGP5-201ENST00000456003 220 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC013267.1-201ENST00000458227 267 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 RNA5SP497-201ENST00000516081 97 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-1092P-201ENST00000516955 87 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-1220P-201ENST00000517126 108 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 OR5D17P-201ENST00000531492 978 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 OR8R1P-201ENST00000543943 764 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 HMGB1P6-201ENST00000569046 646 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 BDH2P1-201ENST00000602288 736 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AL160290.3-201ENST00000604869 165 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC092954.2-201ENST00000609103 430 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 AC140479.6-201ENST00000633535 357 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 LARP1BP1-201ENST00000506036 1359 ntBASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC144BQ3MJ40 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 SPRR2C-201ENST00000290702 219 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 MIR448-201ENST00000362131 111 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNU1-39P-201ENST00000383897 165 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-39P-201ENST00000384344 107 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL445189.1-201ENST00000405722 338 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL603766.1-201ENST00000407763 664 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNU2-36P-201ENST00000410361 191 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNU2-39P-201ENST00000410604 198 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNA5SP39-201ENST00000411245 120 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RPS6P12-201ENST00000432491 726 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC133473.1-201ENST00000455173 299 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC092451.1-201ENST00000480211 153 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RPL21P129-201ENST00000491732 478 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL359273.1-201ENST00000510918 627 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 RNU2-58P-201ENST00000516403 183 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 IFITM8P-201ENST00000522529 394 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AL157687.1-201ENST00000554853 619 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 NCAPGP2-201ENST00000557911 754 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 MED28P6-201ENST00000558776 231 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 MIR8059-201ENST00000620427 81 ntBASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC144BQ3MJ40 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL133243.3-201ENST00000617415 3004 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 RNU1-15P-201ENST00000353977 144 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 Y_RNA.159-201ENST00000363674 87 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 RNU6-1322P-201ENST00000364309 107 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 RNU4-12P-201ENST00000365233 139 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 SNORA36C-201ENST00000384289 132 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 Y_RNA.554-201ENST00000384672 102 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 MIR23B-201ENST00000384832 97 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 BTF3P7-201ENST00000407097 488 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.97□□□□□ -1.61
CCDC144BQ3MJ40 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms