Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC024224.1-201ENST00000538284 609 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 HPRT1P3-201ENST00000539521 576 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX4Q33E94 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.65□□□□□ -1.99
RFX4Q33E94 AL391156.1-201ENST00000554965 554 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 HSPE1P3-201ENST00000559254 309 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.65□□□□□ -1.99
RFX4Q33E94 MIR3944-201ENST00000581277 108 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 RPL23AP88-201ENST00000605759 454 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 AC144521.1-201ENST00000607148 956 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 MIR92B-201ENST00000607575 96 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 AL355810.1-201ENST00000614629 552 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 AC025588.4-201ENST00000615802 908 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 CR381653.2-201ENST00000624041 768 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.65□□□□□ -1.99
RFX4Q33E94 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX4Q33E94 SGO1P2-201ENST00000429458 1589 ntBASIC2.65□□□□□ -1.99
RFX4Q33E94 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
RFX4Q33E94 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFX4Q33E94 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
RFX4Q33E94 AC106754.1-201ENST00000562632 1513 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RFX4Q33E94 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.64□□□□□ -1.99
RFX4Q33E94 OR5H2-201ENST00000355273 945 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 RNU6-560P-201ENST00000364007 108 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 RNU6-1027P-201ENST00000383998 107 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 SNORA54-201ENST00000384281 123 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 RPL19P1-201ENST00000411635 428 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AL513175.2-201ENST00000422071 443 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 USP9YP11-201ENST00000427537 717 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 MTND2P5-201ENST00000432656 1006 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC007327.1-201ENST00000447461 264 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AL358232.1-201ENST00000448030 501 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AP000705.1-201ENST00000454567 350 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 RN7SL807P-201ENST00000470923 297 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AC090525.1-201ENST00000479116 478 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AL358832.1-201ENST00000497800 389 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 RNU6-1095P-201ENST00000516148 108 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.64□□□□□ -1.99
RFX4Q33E94 OR5AK1P-201ENST00000524837 922 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 HSPE1P20-201ENST00000538133 289 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AP001269.3-201ENST00000588718 329 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 BNIP3P26-201ENST00000600827 554 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC091057.2-201ENST00000602594 792 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.64□□□□□ -1.99
RFX4Q33E94 AC010738.1-201ENST00000604970 987 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC243773.3-201ENST00000613270 256 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC004009.2-201ENST00000623016 728 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 AC026422.1-201ENST00000623961 452 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.64□□□□□ -1.99
RFX4Q33E94 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
RFX4Q33E94 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFX4Q33E94 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFX4Q33E94 Y_RNA.192-201ENST00000363977 102 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 RNU4-68P-201ENST00000364314 141 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 RNU6-1074P-201ENST00000383995 104 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 MIR34B-201ENST00000385076 84 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AL096701.2-201ENST00000416920 238 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC106883.1-201ENST00000418805 562 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC099677.1-201ENST00000420575 175 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AL590233.1-201ENST00000430017 456 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX4Q33E94 RPL23AP74-201ENST00000437246 471 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AL513043.1-201ENST00000439124 535 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.63□□□□□ -1.99
RFX4Q33E94 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RFX4Q33E94 OFD1P3Y-201ENST00000453312 783 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 RNA5SP310-201ENST00000459084 116 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AP001992.1-205ENST00000462248 379 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AC090453.1-201ENST00000495560 436 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AC006499.2-201ENST00000513470 337 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 RNU6-583P-201ENST00000516012 92 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 SCARNA1-201ENST00000517138 166 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
RFX4Q33E94 AC018630.1-201ENST00000541376 925 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AC125611.2-201ENST00000551907 647 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AL049838.1-201ENST00000563647 981 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 MIR5004-201ENST00000579078 107 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.63□□□□□ -1.99
RFX4Q33E94 AC060766.3-201ENST00000591442 263 ntBASIC2.63□□□□□ -1.99
RFX4Q33E94 AC021749.1-201ENST00000604322 607 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms