Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC104806.1-201ENST00000508720 308 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 AC098591.2-201ENST00000510152 315 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 TTC39CP1-201ENST00000512513 755 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 RN7SKP256-201ENST00000517201 314 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 MTND4P7-201ENST00000523876 130 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.47□□□□□ -1.69
IRF9Q00978 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.47□□□□□ -1.69
IRF9Q00978 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.47□□□□□ -1.69
IRF9Q00978 AC093012.1-202ENST00000549403 582 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
IRF9Q00978 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.47□□□□□ -1.69
IRF9Q00978 AC005498.1-201ENST00000592125 465 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.47□□□□□ -1.69
IRF9Q00978 AL390240.1-201ENST00000612950 384 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 AC100827.5-201ENST00000615883 426 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
IRF9Q00978 AC090574.1-201ENST00000623186 233 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 MIR4275-201ENST00000636486 87 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.47□□□□□ -1.69
IRF9Q00978 AP004289.2-201ENST00000444413 1457 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
IRF9Q00978 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.47□□□□□ -1.69
IRF9Q00978 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
IRF9Q00978 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
IRF9Q00978 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.47□□□□□ -1.69
IRF9Q00978 A2MP1-204ENST00000566278 4130 ntBASIC4.47□□□□□ -1.69
IRF9Q00978 SCN1A-220ENST00000641603 12506 ntBASIC4.46□□□□□ -1.69
IRF9Q00978 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.69
IRF9Q00978 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
IRF9Q00978 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 AC103710.2-202ENST00000641454 2853 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.46□□□□□ -1.7
IRF9Q00978 Y_RNA.184-201ENST00000363884 108 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 Z98745.1-201ENST00000402553 494 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 NDUFS5P1-201ENST00000405668 289 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 RNU4-46P-201ENST00000410818 138 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 BX323014.1-201ENST00000412876 237 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 RPL7P46-201ENST00000425129 740 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.46□□□□□ -1.7
IRF9Q00978 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.46□□□□□ -1.7
IRF9Q00978 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.46□□□□□ -1.7
IRF9Q00978 RPL23AP93-201ENST00000440847 484 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 RPS11P1-201ENST00000451072 473 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.46□□□□□ -1.7
IRF9Q00978 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 HMGN1P13-201ENST00000505795 138 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 SNORA19.2-201ENST00000516013 114 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 RNU6-390P-201ENST00000516259 103 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 RNU6-277P-201ENST00000516272 106 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 MYL12AP1-201ENST00000518490 515 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 AC109635.4-202ENST00000531666 412 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 OR5D15P-201ENST00000531671 942 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AL137161.1-201ENST00000532231 390 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 AL118558.2-201ENST00000556294 238 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 AL355375.2-201ENST00000574825 175 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 XIAPP1-201ENST00000603162 600 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AL022099.1-201ENST00000604551 712 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 HMGN2P28-201ENST00000606102 262 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AL049539.1-201ENST00000611964 459 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AC004696.1-201ENST00000614345 607 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
IRF9Q00978 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.46□□□□□ -1.7
IRF9Q00978 NEAT1-202ENST00000501122 22743 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.46□□□□□ -1.7
IRF9Q00978 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
IRF9Q00978 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
IRF9Q00978 CPHL1P-201ENST00000461341 3407 ntBASIC4.46□□□□□ -1.7
IRF9Q00978 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.46□□□□□ -1.7
IRF9Q00978 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IRF9Q00978 ZNF137P-201ENST00000456718 1920 ntBASIC4.45□□□□□ -1.7
IRF9Q00978 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
IRF9Q00978 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 U3.12-201ENST00000364498 214 ntBASIC4.45□□□□□ -1.7
IRF9Q00978 RNA5SP22-201ENST00000365393 109 ntBASIC4.45□□□□□ -1.7
IRF9Q00978 Y_RNA.373-201ENST00000365600 103 ntBASIC4.45□□□□□ -1.7
IRF9Q00978 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
IRF9Q00978 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.45□□□□□ -1.7
IRF9Q00978 RNU6-701P-201ENST00000384059 107 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms