Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AL663109.1-201ENST00000411498 844 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 RPL21P24-201ENST00000413752 448 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 ELOCP17-201ENST00000414751 326 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AL691449.1-201ENST00000426570 421 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.15□□□□□ -1.91
CX3CL1P78423 HMGB1P12-201ENST00000438594 598 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AL500522.2-201ENST00000448562 343 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 RPL21P104-201ENST00000464143 478 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 HSPE1P6-201ENST00000479457 291 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AL132838.2-201ENST00000492041 314 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC082651.2-201ENST00000496833 166 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC010587.1-201ENST00000505809 469 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC105914.1-201ENST00000511798 226 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
CX3CL1P78423 MTCO2P32-201ENST00000514865 403 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 MTCO1P35-201ENST00000515270 228 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 Y_RNA.655-201ENST00000515919 96 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 RNA5SP468-201ENST00000516782 93 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 MIR2116-201ENST00000517221 80 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AGGF1P4-201ENST00000568249 801 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC012213.3-201ENST00000577199 777 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 MIR3682-201ENST00000581338 84 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 MIR4293-201ENST00000584305 78 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC004223.2-201ENST00000590309 544 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC087683.1-201ENST00000591187 441 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC006116.10-201ENST00000591836 581 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AC109347.2-201ENST00000610220 349 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 AL732618.1-201ENST00000623251 301 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC110994.2-201ENST00000635481 492 ntBASIC3.15□□□□□ -1.91
CX3CL1P78423 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.15□□□□□ -1.91
CX3CL1P78423 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.15□□□□□ -1.91
CX3CL1P78423 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CX3CL1P78423 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 MAPK10-372ENST00000641954 3413 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 SPRR2C-201ENST00000290702 219 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 DEFB108F-201ENST00000344638 222 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 SNORD116-4-201ENST00000384733 96 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RNU6-278P-201ENST00000390945 109 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RPS3AP36-201ENST00000398190 775 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.14□□□□□ -1.91
CX3CL1P78423 RNU6-195P-201ENST00000411352 109 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RAB28P1-201ENST00000411517 641 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 C1DP2-201ENST00000418167 426 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 YPEL5P1-201ENST00000419731 367 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC007283.2-201ENST00000424739 197 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.14□□□□□ -1.91
CX3CL1P78423 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 TBCAP1-201ENST00000436520 327 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC073614.1-201ENST00000438690 650 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 HMGB1P37-201ENST00000439613 609 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AL662791.1-201ENST00000441992 928 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 NANOGP10-201ENST00000453325 895 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 PPIAP15-201ENST00000479662 484 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC114797.1-201ENST00000514003 728 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 SNORA70.16-201ENST00000516390 95 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RNA5SP337-201ENST00000517007 109 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RNU6-840P-201ENST00000517275 65 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 RNA5SP179-201ENST00000517284 121 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC123904.3-201ENST00000547218 814 ntBASIC3.14□□□□□ -1.91
CX3CL1P78423 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.14□□□□□ -1.91
CX3CL1P78423 OR4H12P-201ENST00000556269 907 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms