Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
TPM4P67936 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.54□□□□□ -2
TPM4P67936 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
TPM4P67936 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TPM4P67936 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.53□□□□□ -2
TPM4P67936 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TPM4P67936 RNU6-270P-201ENST00000364131 105 ntBASIC2.53□□□□□ -2
TPM4P67936 SNORD115-48-201ENST00000364764 76 ntBASIC2.53□□□□□ -2
TPM4P67936 OR5H15-201ENST00000383696 930 ntBASIC2.53□□□□□ -2
TPM4P67936 RNU4-52P-201ENST00000384209 138 ntBASIC2.53□□□□□ -2
TPM4P67936 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.53□□□□□ -2
TPM4P67936 AC093422.3-201ENST00000428506 305 ntBASIC2.53□□□□□ -2
TPM4P67936 AL714022.1-201ENST00000439897 151 ntBASIC2.53□□□□□ -2
TPM4P67936 RPL23AP16-201ENST00000441715 421 ntBASIC2.53□□□□□ -2
TPM4P67936 AC044797.1-201ENST00000445744 679 ntBASIC2.53□□□□□ -2
TPM4P67936 AC233279.1-201ENST00000455300 423 ntBASIC2.53□□□□□ -2
TPM4P67936 AC116337.2-201ENST00000477662 156 ntBASIC2.53□□□□□ -2
TPM4P67936 RPL31P60-201ENST00000478450 367 ntBASIC2.53□□□□□ -2
TPM4P67936 AC004263.1-201ENST00000479327 332 ntBASIC2.53□□□□□ -2
TPM4P67936 AC006390.1-201ENST00000508068 283 ntBASIC2.53□□□□□ -2
TPM4P67936 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.53□□□□□ -2
TPM4P67936 IGJP1-201ENST00000522682 475 ntBASIC2.53□□□□□ -2
TPM4P67936 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.53□□□□□ -2
TPM4P67936 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.53□□□□□ -2
TPM4P67936 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.53□□□□□ -2
TPM4P67936 MIR3117-201ENST00000584034 78 ntBASIC2.53□□□□□ -2
TPM4P67936 AC079791.1-201ENST00000605356 973 ntBASIC2.53□□□□□ -2
TPM4P67936 AC097504.2-201ENST00000608088 454 ntBASIC2.53□□□□□ -2
TPM4P67936 AC245100.7-201ENST00000609678 442 ntBASIC2.53□□□□□ -2
TPM4P67936 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.53□□□□□ -2
TPM4P67936 AL442067.2-201ENST00000614033 363 ntBASIC2.53□□□□□ -2
TPM4P67936 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TPM4P67936 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
TPM4P67936 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
TPM4P67936 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM4P67936 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM4P67936 AC009812.4-201ENST00000569134 1805 ntBASIC2.52□□□□□ -2.01
TPM4P67936 OR5J1P-201ENST00000313544 939 ntBASIC2.52□□□□□ -2.01
TPM4P67936 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TPM4P67936 MIR767-201ENST00000390228 109 ntBASIC2.52□□□□□ -2.01
TPM4P67936 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TPM4P67936 U3.20-201ENST00000390909 217 ntBASIC2.52□□□□□ -2.01
TPM4P67936 RNU6-882P-201ENST00000391025 103 ntBASIC2.52□□□□□ -2.01
TPM4P67936 SNORA48.7-201ENST00000391302 135 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AL009174.1-201ENST00000426577 416 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 AC104164.3-201ENST00000467363 1258 ntBASIC2.52□□□□□ -2.01
TPM4P67936 FAM172BP-201ENST00000487497 1089 ntBASIC2.52□□□□□ -2.01
TPM4P67936 EIF4EP3-201ENST00000498782 656 ntBASIC2.52□□□□□ -2.01
TPM4P67936 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM4P67936 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.52□□□□□ -2.01
TPM4P67936 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TPM4P67936 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 GTF3AP2-201ENST00000557014 266 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AC025918.2-201ENST00000558683 763 ntBASIC2.52□□□□□ -2.01
TPM4P67936 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 MIR5007-201ENST00000583098 95 ntBASIC2.52□□□□□ -2.01
TPM4P67936 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.52□□□□□ -2.01
TPM4P67936 AP005137.2-201ENST00000609238 400 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AC013562.2-201ENST00000611632 603 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AC079395.3-201ENST00000615161 484 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AL160394.1-201ENST00000624765 724 ntBASIC2.52□□□□□ -2.01
TPM4P67936 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.52□□□□□ -2.01
TPM4P67936 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.52□□□□□ -2.01
TPM4P67936 AC097714.1-201ENST00000511272 1647 ntBASIC2.51□□□□□ -2.01
TPM4P67936 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM4P67936 SNORD51-201ENST00000384320 80 ntBASIC2.51□□□□□ -2.01
TPM4P67936 MIR525-201ENST00000384978 85 ntBASIC2.51□□□□□ -2.01
TPM4P67936 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 AL121978.1-201ENST00000402778 359 ntBASIC2.51□□□□□ -2.01
TPM4P67936 AL133384.1-201ENST00000412744 351 ntBASIC2.51□□□□□ -2.01
TPM4P67936 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 AL358075.3-201ENST00000426289 226 ntBASIC2.51□□□□□ -2.01
TPM4P67936 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM4P67936 MTCYBP3-201ENST00000445588 1137 ntBASIC2.51□□□□□ -2.01
TPM4P67936 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM4P67936 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM4P67936 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
TPM4P67936 AC234781.5-201ENST00000508429 271 ntBASIC2.51□□□□□ -2.01
TPM4P67936 RNU6-798P-201ENST00000516912 103 ntBASIC2.51□□□□□ -2.01
TPM4P67936 SUB1P1-201ENST00000524415 382 ntBASIC2.51□□□□□ -2.01
TPM4P67936 COX6CP5-201ENST00000527162 228 ntBASIC2.51□□□□□ -2.01
TPM4P67936 UBTFL10-201ENST00000528532 562 ntBASIC2.51□□□□□ -2.01
TPM4P67936 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM4P67936 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.51□□□□□ -2.01
TPM4P67936 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.51□□□□□ -2.01
TPM4P67936 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM4P67936 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.51□□□□□ -2.01
TPM4P67936 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.51□□□□□ -2.01
TPM4P67936 AC002487.1-201ENST00000604565 994 ntBASIC2.51□□□□□ -2.01
TPM4P67936 AP000553.5-201ENST00000641933 54 ntBASIC2.51□□□□□ -2.01
TPM4P67936 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TPM4P67936 AL022578.1-201ENST00000439330 1433 ntBASIC2.51□□□□□ -2.01
TPM4P67936 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TPM4P67936 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms