Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HERVK_113P62684 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.79□□□□□ -1.64
HERVK_113P62684 RN7SKP247-201ENST00000411094 308 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 MTCO3P12-201ENST00000416718 547 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.79□□□□□ -1.64
HERVK_113P62684 GOT2P5-201ENST00000433995 546 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AL500522.2-201ENST00000448562 343 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.79□□□□□ -1.64
HERVK_113P62684 RPS20P24-201ENST00000457473 361 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 RPL7L1P8-201ENST00000469911 741 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 RPS3AP50-201ENST00000487064 803 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC110792.1-201ENST00000491826 472 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC021146.1-201ENST00000511202 716 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC010486.1-201ENST00000511793 424 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 SNORA40.12-201ENST00000516329 111 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 SCARNA24.1-201ENST00000516465 137 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 ARL2BPP2-201ENST00000550907 489 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.79□□□□□ -1.64
HERVK_113P62684 HMGB1P6-201ENST00000569046 646 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC120057.2-201ENST00000571520 271 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 HNRNPCP4-201ENST00000571636 900 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 AL354950.2-201ENST00000617939 290 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC012442.3-202ENST00000636742 206 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 AC100810.6-201ENST00000638068 285 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
HERVK_113P62684 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.79□□□□□ -1.64
HERVK_113P62684 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HERVK_113P62684 AC011978.2-201ENST00000569835 2054 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 MTND5P17-201ENST00000418405 1603 ntBASIC4.79□□□□□ -1.64
HERVK_113P62684 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HERVK_113P62684 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERVK_113P62684 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HERVK_113P62684 MAPK10-253ENST00000641010 4072 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 MIR208A-201ENST00000362287 71 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERVK_113P62684 Y_RNA.509-201ENST00000384506 99 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 MIR200C-201ENST00000384980 68 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 MIR1179-201ENST00000408703 91 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 SDCBPP3-201ENST00000419629 891 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AL691449.1-201ENST00000426570 421 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC008850.1-201ENST00000427546 362 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AC140076.1-201ENST00000449897 361 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC104308.1-201ENST00000454621 333 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 RNU7-63P-201ENST00000459054 62 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 RNU6-410P-201ENST00000517006 107 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.78□□□□□ -1.64
HERVK_113P62684 OR4P1P-201ENST00000530808 1136 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.78□□□□□ -1.64
HERVK_113P62684 PDCD5P1-201ENST00000543528 309 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HERVK_113P62684 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AC055876.1-202ENST00000567053 138 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 MIR4512-201ENST00000583257 77 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 KC877982.1-201ENST00000602313 470 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AC007566.2-201ENST00000603642 413 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC004853.1-201ENST00000604902 698 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC113194.1-201ENST00000606037 500 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 AC138649.5-201ENST00000637456 137 ntBASIC4.78□□□□□ -1.64
HERVK_113P62684 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HERVK_113P62684 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.77□□□□□ -1.65
HERVK_113P62684 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC009902.3-201ENST00000606235 2172 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 RNU6-359P-201ENST00000365466 108 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 RNY3P13-201ENST00000365542 102 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 MIR93-201ENST00000385024 80 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC127526.1-201ENST00000417526 366 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 TIMM9P1-201ENST00000436122 256 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 FTH1P1-201ENST00000437933 532 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AL138799.3-201ENST00000438968 350 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC006011.1-201ENST00000442758 349 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC079781.2-201ENST00000446424 169 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC010469.1-201ENST00000463864 576 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 RPS20P21-201ENST00000466859 343 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC006512.1-201ENST00000468816 291 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC233702.1-201ENST00000482905 502 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC139783.2-201ENST00000504847 1145 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.77□□□□□ -1.65
HERVK_113P62684 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms