Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 RN7SL826P-201ENST00000479724 288 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 LARP1BP1-201ENST00000506036 1359 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC104806.1-201ENST00000508720 308 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 AC108078.2-201ENST00000510750 236 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 OR7H2P-201ENST00000513483 306 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 SCARNA15.1-201ENST00000516384 125 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 Y_RNA.691-201ENST00000516611 103 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.08□□□□□ -1.76
CLRN1P58418 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 AL049555.1-201ENST00000562834 1933 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC209154.1-201ENST00000582156 337 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 AF038458.1-201ENST00000588406 262 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC010680.4-201ENST00000605334 543 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 AL390240.1-201ENST00000612950 384 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AL450472.3-201ENST00000615578 367 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC068831.8-201ENST00000620171 435 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.08□□□□□ -1.76
CLRN1P58418 AL589994.2-201ENST00000621124 579 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 AC110801.1-201ENST00000623590 212 ntBASIC4.08□□□□□ -1.76
CLRN1P58418 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
CLRN1P58418 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CLRN1P58418 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLRN1P58418 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLRN1P58418 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.07□□□□□ -1.76
CLRN1P58418 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CLRN1P58418 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 RN7SKP103-201ENST00000363848 320 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 SMIM11P1-201ENST00000369586 178 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 Y_RNA.474-201ENST00000384341 102 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 RNU6-837P-201ENST00000391056 108 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL356967.1-201ENST00000406305 431 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 RN7SKP140-201ENST00000411196 284 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 AL354751.2-201ENST00000415471 210 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 ARL5AP1-201ENST00000418991 388 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 RPL7P46-201ENST00000425129 740 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL590762.4-201ENST00000425885 253 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC018644.1-201ENST00000429934 551 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC024082.2-201ENST00000434771 238 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC004866.2-201ENST00000438285 481 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 SCARNA10-201ENST00000459255 330 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.07□□□□□ -1.76
CLRN1P58418 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 RPL23AP65-201ENST00000475608 468 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC007016.1-201ENST00000512110 244 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN1P58418 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 ATP5J2P6-201ENST00000565203 266 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.07□□□□□ -1.76
CLRN1P58418 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN1P58418 LLPHP1-201ENST00000603571 367 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.6-201ENST00000603753 252 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.11-201ENST00000604059 253 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL022099.1-201ENST00000604551 712 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC008162.1-201ENST00000604718 254 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.1-201ENST00000604752 252 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 IGHV3-29-201ENST00000604817 344 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.5-201ENST00000605253 252 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.12-201ENST00000605291 253 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.8-201ENST00000605353 252 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 CTHRC1P1-201ENST00000605383 469 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AL670379.7-201ENST00000605823 252 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC103710.3-201ENST00000608157 948 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC092807.2-201ENST00000609367 243 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC004696.1-201ENST00000614345 607 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 MIR6715B-201ENST00000637172 77 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 AC026951.1-201ENST00000559530 2459 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.07□□□□□ -1.76
CLRN1P58418 AL592437.2-201ENST00000421655 2434 ntBASIC4.07□□□□□ -1.76
CLRN1P58418 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.07□□□□□ -1.76
CLRN1P58418 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLRN1P58418 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms