Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NEK3P51956 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.17□□□□□ -1.74
NEK3P51956 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NEK3P51956 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 AL136164.4-201ENST00000625013 2135 ntBASIC4.16□□□□□ -1.74
NEK3P51956 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 RNY4P16-201ENST00000364768 94 ntBASIC4.16□□□□□ -1.74
NEK3P51956 SNORA75-201ENST00000384158 137 ntBASIC4.16□□□□□ -1.74
NEK3P51956 RNU6-297P-201ENST00000384636 107 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL359634.1-202ENST00000404721 284 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL591034.1-201ENST00000407447 340 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL589872.1-201ENST00000426602 288 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.16□□□□□ -1.74
NEK3P51956 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.16□□□□□ -1.74
NEK3P51956 AC009961.2-201ENST00000435771 251 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL136380.1-201ENST00000447970 162 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC007537.2-201ENST00000472093 511 ntBASIC4.16□□□□□ -1.74
NEK3P51956 RAP1BP2-201ENST00000478270 544 ntBASIC4.16□□□□□ -1.74
NEK3P51956 MTND1P3-201ENST00000484956 952 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.16□□□□□ -1.74
NEK3P51956 AC010587.1-201ENST00000505809 469 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC079140.3-201ENST00000511111 550 ntBASIC4.16□□□□□ -1.74
NEK3P51956 MTND3P5-201ENST00000512798 333 ntBASIC4.16□□□□□ -1.74
NEK3P51956 MTCO3P28-201ENST00000513351 515 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC026402.1-201ENST00000513642 170 ntBASIC4.16□□□□□ -1.74
NEK3P51956 RNU2-46P-201ENST00000517038 113 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
NEK3P51956 AC124947.2-202ENST00000552735 133 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.16□□□□□ -1.74
NEK3P51956 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.16□□□□□ -1.74
NEK3P51956 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.16□□□□□ -1.74
NEK3P51956 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.16□□□□□ -1.74
NEK3P51956 AC128687.2-201ENST00000609657 566 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL390240.1-201ENST00000612950 384 ntBASIC4.16□□□□□ -1.74
NEK3P51956 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AC092656.1-203ENST00000624134 423 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL773545.4-201ENST00000637262 310 ntBASIC4.16□□□□□ -1.74
NEK3P51956 AL513478.4-201ENST00000641636 310 ntBASIC4.16□□□□□ -1.74
NEK3P51956 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.16□□□□□ -1.74
NEK3P51956 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
NEK3P51956 RLIMP1-201ENST00000339626 1680 ntBASIC4.16□□□□□ -1.74
NEK3P51956 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.16□□□□□ -1.74
NEK3P51956 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NEK3P51956 CUL1P1-201ENST00000509510 2425 ntBASIC4.15□□□□□ -1.74
NEK3P51956 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.15□□□□□ -1.74
NEK3P51956 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
NEK3P51956 BDP1P-201ENST00000582658 1990 ntBASIC4.15□□□□□ -1.74
NEK3P51956 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK3P51956 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK3P51956 OR1S2-201ENST00000302592 978 ntBASIC4.15□□□□□ -1.75
NEK3P51956 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NEK3P51956 RNU6-623P-201ENST00000363143 105 ntBASIC4.15□□□□□ -1.75
NEK3P51956 U8.3-201ENST00000363321 132 ntBASIC4.15□□□□□ -1.75
NEK3P51956 RNU4-1-201ENST00000363925 141 ntBASIC4.15□□□□□ -1.75
NEK3P51956 RNA5SP283-201ENST00000365604 119 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK3P51956 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
NEK3P51956 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK3P51956 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK3P51956 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK3P51956 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.15□□□□□ -1.75
NEK3P51956 AL356535.1-201ENST00000440335 398 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AL022238.1-201ENST00000442557 355 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK3P51956 AC010631.1-201ENST00000474150 156 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AC146944.2-203ENST00000502493 354 ntBASIC4.15□□□□□ -1.75
NEK3P51956 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK3P51956 NDUFB4P2-201ENST00000509515 391 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AC139495.1-202ENST00000513164 354 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AC022447.1-201ENST00000515358 464 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AC128657.1-201ENST00000549459 145 ntBASIC4.15□□□□□ -1.75
NEK3P51956 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.15□□□□□ -1.75
NEK3P51956 AC022968.1-201ENST00000567372 442 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK3P51956 AC138932.5-201ENST00000617759 563 ntBASIC4.15□□□□□ -1.75
NEK3P51956 AP005264.7-201ENST00000625003 745 ntBASIC4.15□□□□□ -1.75
NEK3P51956 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NEK3P51956 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEK3P51956 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.15□□□□□ -1.75
NEK3P51956 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NEK3P51956 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NEK3P51956 AL137003.2-201ENST00000606924 2538 ntBASIC4.14□□□□□ -1.75
NEK3P51956 SNORA60-201ENST00000362396 134 ntBASIC4.14□□□□□ -1.75
NEK3P51956 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.14□□□□□ -1.75
NEK3P51956 U3.42-201ENST00000408746 214 ntBASIC4.14□□□□□ -1.75
NEK3P51956 MIR1183-201ENST00000408856 89 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL513331.1-201ENST00000411908 397 ntBASIC4.14□□□□□ -1.75
NEK3P51956 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK3P51956 RPS15AP12-201ENST00000419498 388 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.14□□□□□ -1.75
NEK3P51956 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.14□□□□□ -1.75
NEK3P51956 MTCO3P5-201ENST00000433620 714 ntBASIC4.14□□□□□ -1.75
NEK3P51956 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms