Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RPL21P11-201ENST00000461458 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RPL21P39-201ENST00000463605 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RPL21P104-201ENST00000464143 478 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AC132942.1-201ENST00000486753 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF144AP50876 AC093591.1-201ENST00000491435 481 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RN7SL57P-201ENST00000493687 290 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 RPL21P16-201ENST00000495531 483 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 MRPS33P2-201ENST00000507850 322 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 GLUD1P3-202ENST00000508551 200 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF144AP50876 SNORA31.3-201ENST00000516029 96 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF144AP50876 AC090022.1-201ENST00000546569 311 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF144AP50876 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF144AP50876 BDH2P1-201ENST00000602288 736 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AL078605.1-201ENST00000603529 500 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 AC024884.1-201ENST00000620583 399 ntBASIC5.37□□□□□ -1.55
RNF144AP50876 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF144AP50876 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF144AP50876 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF144AP50876 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF144AP50876 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF144AP50876 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 AL121839.2-201ENST00000565058 6943 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 Y_RNA.8-201ENST00000362353 102 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 RN7SKP78-201ENST00000364711 318 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AC019155.1-201ENST00000382242 574 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 MIR135A2-201ENST00000384854 100 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 RNU2-51P-201ENST00000410708 197 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 RN7SKP51-201ENST00000410781 304 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF144AP50876 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF144AP50876 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 RNU7-87P-201ENST00000459343 62 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 U8.21-201ENST00000459536 136 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF144AP50876 MRPL42P6-201ENST00000486397 371 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 RPS15AP34-201ENST00000487776 387 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 MTND5P41-201ENST00000517498 206 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AL590705.4-201ENST00000532209 134 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF144AP50876 AC007956.1-201ENST00000555623 542 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF144AP50876 AL499605.1-201ENST00000604628 403 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 AL133481.2-203ENST00000607558 139 ntBASIC5.36□□□□□ -1.55
RNF144AP50876 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RNF144AP50876 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF144AP50876 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF144AP50876 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RNF144AP50876 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF144AP50876 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF144AP50876 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
RNF144AP50876 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF144AP50876 RNA5SP500-201ENST00000364486 119 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 RNY4P28-201ENST00000365281 93 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 RNU6-804P-201ENST00000384286 107 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 MIR190B-201ENST00000401119 79 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.35□□□□□ -1.55
RNF144AP50876 BX679664.1-201ENST00000434429 253 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 RANP8-201ENST00000444720 713 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 BX276092.4-201ENST00000452056 248 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 GEMIN2P1-201ENST00000454246 752 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 COX6CP14-201ENST00000469580 174 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 RN7SL188P-201ENST00000469842 285 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 DUTP1-201ENST00000493631 470 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 RPL7P47-201ENST00000497299 556 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 AC025458.1-201ENST00000506046 166 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF144AP50876 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF144AP50876 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
RNF144AP50876 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF144AP50876 PRPF19P1-201ENST00000584766 898 ntBASIC5.35□□□□□ -1.55
RNF144AP50876 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.35□□□□□ -1.55
RNF144AP50876 AC006272.2-201ENST00000594725 163 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms