Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LHX1P48742 AC010486.2-201ENST00000505572 483 ntBASIC3.43□□□□□ -1.86
LHX1P48742 POU5F1P7-201ENST00000508759 541 ntBASIC3.43□□□□□ -1.86
LHX1P48742 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.43□□□□□ -1.86
LHX1P48742 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
LHX1P48742 AC068587.4-201ENST00000533893 186 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC004024.1-201ENST00000549244 247 ntBASIC3.43□□□□□ -1.86
LHX1P48742 MRPS36P5-201ENST00000551909 298 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC007954.1-201ENST00000554198 494 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.43□□□□□ -1.86
LHX1P48742 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.43□□□□□ -1.86
LHX1P48742 OR4K8P-201ENST00000578842 1048 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.43□□□□□ -1.86
LHX1P48742 AC012493.2-201ENST00000595083 291 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC011451.2-201ENST00000604303 598 ntBASIC3.43□□□□□ -1.86
LHX1P48742 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC097468.3-201ENST00000607956 456 ntBASIC3.43□□□□□ -1.86
LHX1P48742 VIS1.1-201ENST00000610517 203 ntBASIC3.43□□□□□ -1.86
LHX1P48742 MIR8057-201ENST00000620957 69 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AL590240.3-201ENST00000621416 943 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AP000676.3-201ENST00000623299 569 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC048347.1-201ENST00000624621 427 ntBASIC3.43□□□□□ -1.86
LHX1P48742 AC099063.3-201ENST00000642066 185 ntBASIC3.43□□□□□ -1.86
LHX1P48742 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
LHX1P48742 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.43□□□□□ -1.86
LHX1P48742 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
LHX1P48742 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
LHX1P48742 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.42□□□□□ -1.86
LHX1P48742 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
LHX1P48742 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 AC116096.1-201ENST00000566804 2314 ntBASIC3.42□□□□□ -1.86
LHX1P48742 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 Y_RNA.169-201ENST00000363745 96 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RNU6-660P-201ENST00000364566 109 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RNU6-359P-201ENST00000365466 108 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RNU4-72P-201ENST00000410754 173 ntBASIC3.42□□□□□ -1.86
LHX1P48742 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.42□□□□□ -1.86
LHX1P48742 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.42□□□□□ -1.86
LHX1P48742 BX119904.4-201ENST00000424402 301 ntBASIC3.42□□□□□ -1.86
LHX1P48742 BX890604.2-201ENST00000427883 474 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.42□□□□□ -1.86
LHX1P48742 AL590103.1-201ENST00000434488 307 ntBASIC3.42□□□□□ -1.86
LHX1P48742 HMGB3P11-201ENST00000440127 604 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AL831737.1-201ENST00000441288 271 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.42□□□□□ -1.86
LHX1P48742 RN7SL863P-201ENST00000462370 296 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RPL30P9-201ENST00000465586 330 ntBASIC3.42□□□□□ -1.86
LHX1P48742 TMED11P-201ENST00000479478 690 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RPS3AP43-201ENST00000479743 781 ntBASIC3.42□□□□□ -1.86
LHX1P48742 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.42□□□□□ -1.86
LHX1P48742 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.42□□□□□ -1.86
LHX1P48742 RNU6-232P-201ENST00000517144 64 ntBASIC3.42□□□□□ -1.86
LHX1P48742 RN7SKP289-201ENST00000517244 295 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.42□□□□□ -1.86
LHX1P48742 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.42□□□□□ -1.86
LHX1P48742 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.42□□□□□ -1.86
LHX1P48742 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.42□□□□□ -1.86
LHX1P48742 FAM60BP-201ENST00000578364 658 ntBASIC3.42□□□□□ -1.86
LHX1P48742 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 AC013444.2-201ENST00000603317 787 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AC004223.4-201ENST00000612426 332 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AC002550.2-201ENST00000621246 394 ntBASIC3.42□□□□□ -1.86
LHX1P48742 AC079248.2-201ENST00000623779 326 ntBASIC3.42□□□□□ -1.86
LHX1P48742 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LHX1P48742 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
LHX1P48742 MTND4P16-201ENST00000466108 1367 ntBASIC3.41□□□□□ -1.86
LHX1P48742 OR1S2-201ENST00000302592 978 ntBASIC3.41□□□□□ -1.86
LHX1P48742 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 RNU6-853P-201ENST00000364306 107 ntBASIC3.41□□□□□ -1.86
LHX1P48742 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 MIR135A2-201ENST00000384854 100 ntBASIC3.41□□□□□ -1.86
LHX1P48742 MIR1305-201ENST00000408300 86 ntBASIC3.41□□□□□ -1.86
LHX1P48742 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 AP000542.1-201ENST00000448473 371 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC234775.1-201ENST00000454247 670 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 RPL21P104-201ENST00000464143 478 ntBASIC3.41□□□□□ -1.86
LHX1P48742 RPL23AP14-201ENST00000468281 468 ntBASIC3.41□□□□□ -1.86
LHX1P48742 BZW1P2-201ENST00000473537 826 ntBASIC3.41□□□□□ -1.86
LHX1P48742 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.41□□□□□ -1.86
LHX1P48742 AC021382.1-201ENST00000483523 359 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 AC034222.1-201ENST00000494052 532 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AP001086.1-201ENST00000494882 321 ntBASIC3.41□□□□□ -1.86
LHX1P48742 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.41□□□□□ -1.86
LHX1P48742 AC022447.3-201ENST00000506865 495 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.41□□□□□ -1.86
LHX1P48742 MTND1P22-201ENST00000510572 951 ntBASIC3.41□□□□□ -1.86
LHX1P48742 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LHX1P48742 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.41□□□□□ -1.86
LHX1P48742 RNU6-528P-201ENST00000516926 100 ntBASIC3.41□□□□□ -1.86
LHX1P48742 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms