Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 U73023.1-201ENST00000603134 700 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AL035411.2-201ENST00000604022 421 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AL158050.2-201ENST00000605336 568 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AL138478.1-201ENST00000612252 832 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AL020991.1-201ENST00000612314 373 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC024257.5-201ENST00000612739 531 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC010338.1-201ENST00000621823 717 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC091953.5-201ENST00000622919 233 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.56□□□□□ -2
CSNK1A1P48729 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC107982.1-201ENST00000507171 1300 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC096644.4-201ENST00000563417 2912 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.56□□□□□ -2
CSNK1A1P48729 AC008669.1-201ENST00000565823 2178 ntBASIC2.56□□□□□ -2
CSNK1A1P48729 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.55□□□□□ -2
CSNK1A1P48729 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSNK1A1P48729 TPTE2P4-201ENST00000258589 1605 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CSNK1A1P48729 RPL9P7-201ENST00000330965 580 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CSNK1A1P48729 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSNK1A1P48729 RNU1-35P-201ENST00000362782 153 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 RNA5SP387-201ENST00000364226 106 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 SNORD56.5-201ENST00000364281 72 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 SNORA70.4-201ENST00000365509 134 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 Y_RNA.472-201ENST00000384322 102 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 MIR122-201ENST00000385044 85 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 RAP1BP1-201ENST00000412709 553 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AL451074.5-201ENST00000415894 435 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 Z75741.2-201ENST00000417272 1167 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 MTCYBP11-201ENST00000447254 1109 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 RPL39P6-201ENST00000448289 150 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 RSL24D1P3-201ENST00000449255 495 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC009901.1-201ENST00000506703 541 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC098799.2-201ENST00000509466 868 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC006445.2-201ENST00000510061 472 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.55□□□□□ -2
CSNK1A1P48729 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.55□□□□□ -2
CSNK1A1P48729 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 AP000867.2-201ENST00000532468 320 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.55□□□□□ -2
CSNK1A1P48729 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.55□□□□□ -2
CSNK1A1P48729 AC109315.1-201ENST00000584143 1347 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.55□□□□□ -2
CSNK1A1P48729 BNIP3P24-201ENST00000593398 557 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 VN1R83P-201ENST00000595685 445 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.55□□□□□ -2
CSNK1A1P48729 AC097504.2-201ENST00000608088 454 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AP000254.1-201ENST00000609934 520 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 AL121895.2-201ENST00000619558 447 ntBASIC2.55□□□□□ -2
CSNK1A1P48729 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.55□□□□□ -2
CSNK1A1P48729 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.55□□□□□ -2
CSNK1A1P48729 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CSNK1A1P48729 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CSNK1A1P48729 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
CSNK1A1P48729 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CSNK1A1P48729 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.54□□□□□ -2
CSNK1A1P48729 DEFB108F-201ENST00000344638 222 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 MIR181B1-201ENST00000385240 110 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 MRPS36P1-201ENST00000421291 307 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.54□□□□□ -2
CSNK1A1P48729 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.54□□□□□ -2
CSNK1A1P48729 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 MTCO1P53-201ENST00000441633 699 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.54□□□□□ -2
CSNK1A1P48729 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 RPL37P4-201ENST00000448908 268 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 RN7SL499P-201ENST00000481141 276 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 AC108734.3-201ENST00000481241 1165 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.54□□□□□ -2
CSNK1A1P48729 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC113347.3-201ENST00000509113 148 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC010374.2-201ENST00000512933 535 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.54□□□□□ -2
CSNK1A1P48729 DEFB108D-201ENST00000527787 222 ntBASIC2.54□□□□□ -2
CSNK1A1P48729 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.54□□□□□ -2
CSNK1A1P48729 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.54□□□□□ -2
CSNK1A1P48729 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms